Evidence map›Paper›PMID 31248374›Full record

ArticleBMC plant biology2019

Transgenerational memory of gene expression changes induced by heavy metal stress in rice (Oryza sativa L.).

Weixuan Cong, Yiling Miao, Lei Xu, Yunhong Zhang, Chunlei Yuan, Junmeng Wang, Tingting Zhuang, Xiuyun Lin, Lili Jiang, Ningning Wang and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
19.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 169 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Drought stress inFrontiers in plant science · 2026
    Review
  5. Review
  6. Review
  7. Review
  8. DNA Methylation in Rice: Mechanisms, Regulatory Roles, and Beyond.International journal of molecular sciences · 2025
    Review
  9. Review
  10. Physiological and Metabolic Responses of Wheat (ACS agricultural science & technology · 2025
    Article
  11. Article
  12. Insights into the Epigenetic Basis of Plant Salt Tolerance.International journal of molecular sciences · 2024
    Review
  13. Review
  14. Establishment and Maintenance of Heat-Stress Memory in Plants.International journal of molecular sciences · 2024
    Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Revisiting plant stress memory: mechanisms and contribution to stress adaptation.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Weixuan CongKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Yiling MiaoKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Lei XuKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Yunhong ZhangKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Chunlei YuanKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Junmeng WangKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Tingting ZhuangKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Xiuyun LinJilin Academy of Agricultural Sciences, Changchun, 130033, China.
Lili JiangKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Ningning WangJilin Agriculture University, Changchun, 130000, China.
Jian MaJilin Agriculture University, Changchun, 130000, China.
Karen A SanguinetDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164, USA.
Bao LiuKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China.
Sachin RustgiDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA, 99164, USA. srustgi@clemson.edu.
Xiufang OuKey Laboratory of Molecular Epigenetics of MOE and Institute of Genetics & Cytology, Northeast Normal University, Changchun, 130024, China. ouxf074@nenu.edu.cn.ORCID http://orcid.org/0000-0001-6074-2434
Northeast Normal University · CNJilin Agricultural University · CNWashington State University · USJilin Academy of Agricultural Sciences · CN

Funding

Batten Institute for Innovation and Entrepreneurship, Darden School of Business, University of Virginia (US) 201810200055National Natural Science Foundation of China 31200198National Natural Science Foundation of China 31400256
6 · The paper itself

Abstract

backgroundHeavy metal toxicity has become a major threat to sustainable crop production worldwide. Thus, considerable interest has been placed on deciphering the mechanisms that allow plants to combat heavy metal stress. Strategies to deal with heavy metals are largely focused on detoxification, transport and/or sequestration. The P

resultsWe found most HMA genes were upregulated in response to heavy metal stress, and furthermore found evidence of transgenerational memory via changes in gene regulation even after the removal of heavy metals. To explore whether DNA methylation was also altered in response to the heavy metal stress, we selected a Tos17 retrotransposon for bisulfite sequencing and studied its methylation state across three generations. We found the DNA methylation state of Tos17 was altered in response to the heavy metal stress and showed transgenerational inheritance.

conclusionsCollectively, the present study elucidates heritable changes in gene expression and DNA methylation in rice upon exposure to heavy metal stress and discusses implications of this knowledge in breeding for heavy metal tolerant crops.

Indexed as

Adenosine TriphosphatasesEpigenesis, GeneticGene ExpressionMetals, HeavyOryzaPlant ProteinsSoil PollutantsStress, PhysiologicalAdenosine TriphosphatasesMetals, HeavyPlant ProteinsSoil PollutantsDNA methylationGene expressionHeavy metal stressTransgenerational memory

Identifiers

PMID31248374
PMCPMC6598230
OpenAlexW2956117561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.