ArticleGenes2019
Population Genetic Divergence and Environment Influence the Gut Microbiome in Oregon Threespine Stickleback.
Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
19 citing papers in PubMed, 52 citations in OpenAlex.
- Microbial community composition variation in relation to malaria infections in Junco hyemalis.PloS one · 2026Article
- Spontaneous mutant in threespine stickleback connects endosome trafficking disorders and inflammatory bowel diseases via changes in the gut microbiome.bioRxiv : the preprint server for biology · 2025Article
- Host traits and environmental variation shape gut microbiota diversity in wild threespine stickleback.Animal microbiome · 2025Article
- Host ecotype and rearing environment are the main drivers of threespine stickleback gut microbiota diversity in a naturalistic experiment.Royal Society open science · 2024Article
- Wild Avian Gut Microbiome at a Small Spatial Scale: A Study from a Mediterranean Island Population ofAnimals : an open access journal from MDPI · 2023Article
- Gut microbiota of an Amazonian fish in a heterogeneous riverscape: integrating genotype, environment, and parasitic infections.Microbiology spectrum · 2023Article
- Microbiomes in the context of developing sustainable intensified aquaculture.Frontiers in microbiology · 2023Review
- Assessing the validity of fecal sampling for characterizing variation in threespine stickleback's gut microbiota.PloS one · 2023Article
- Phylogenetically under-dispersed gut microbiomes are not correlated with host genomic heterozygosity in a genetically diverse reptile community.Molecular ecology · 2023Article
- Quantifying (non)parallelism of gut microbial community change using multivariate vector analysis.Ecology and evolution · 2022Article
- Article
- Gut Microbiome Analyses of Wild Migratory Freshwater Fish (Frontiers in microbiology · 2022Article
- Cross-Sectional Analysis of the Microbiota of Human Gut and Its Direct Environment in a Household Cohort with High Background of Antibiotic Use.Microorganisms · 2021Article
- Threespine Stickleback: A Model System For Evolutionary Genomics.Annual review of genomics and human genetics · 2021Review
- Sympatric threatened Iberian leuciscids exhibit differences in Aeromonas diversity and skin lesions' prevalence.PloS one · 2021Article
- Review
- Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream.Microbiome · 2020Article
- Early life disruption of the microbiota affects organ development and cytokine gene expression in threespine stickleback.Integrative and comparative biology · 2020Article
- Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
Abstract
Much of animal-associated microbiome research has been conducted in species for which little is known of their natural ecology and evolution. Microbiome studies that combine population genetic, environment, and geographic data for wild organisms can be very informative, especially in situations where host genetic variation and the environment both influence microbiome variation. The few studies that have related population genetic and microbiome variation in wild populations have been constrained by observation-based kinship data or incomplete genomic information. Here we integrate population genomic and microbiome analyses in wild threespine stickleback fish distributed throughout western Oregon, USA. We found that gut microbiome diversity and composition partitioned more among than within wild host populations and was better explained by host population genetic divergence than by environment and geography. We also identified gut microbial taxa that were most differentially abundant across environments and across genetically divergent populations. Our findings highlight the benefits of studies that investigate host-associated microbiomes in wild organisms.
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.