Evidence map›Paper›PMID 31246949›Full record

ArticlePLoS computational biology2019

From trainees to trainers to instructors: Sustainably building a national capacity in bioinformatics training.

Annette McGrath, Katherine Champ, Catherine A Shang, Ellen van Dam, Cath Brooksbank, Sarah L Morgan

Abstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  5. Article
  6. Article
  7. Galaxy Training: A powerful framework for teaching!PLoS computational biology · 2023
    Article
  8. Article
  9. Article
  10. Train-the-Trainer as an Effective Approach to Building Global Networks of Experts in Genomic Surveillance of Antimicrobial Resistance (AMR).Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Bridging the Python Training Gap for Bioscientists in Brazil: Improvements and Challenges.Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Annette McGrathData61, CSIRO, Brisbane, Queensland, Australia.ORCID 0000-0002-1765-7039
Katherine ChampBioplatforms Australia, Sydney, New South Wales, Australia.ORCID 0000-0002-9841-9883
Catherine A ShangBioplatforms Australia, Sydney, New South Wales, Australia.ORCID 0000-0002-5116-4668
Ellen van DamBioplatforms Australia, Sydney, New South Wales, Australia.
Cath BrooksbankEMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.ORCID 0000-0001-9395-7001
Sarah L MorganEMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.ORCID 0000-0001-9528-8323

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Demand for training life scientists in bioinformatics skills led to the development of a train-the-trainer collaboration between the European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI) and 2 Australian organisations, Bioplatforms Australia and Commonwealth Scientific and Industrial Research Organisation (CSIRO) in 2012. The goal of the collaboration was to establish a group of trained instructors who could develop and deliver short bioinformatics courses nationally. A train-the-trainer course introduces instructors to aspects of andragogy and evidence-based learning principles to help them better design, develop, and deliver high-quality training. Since then, both the number of trainers in the network and the course portfolio have grown. Best practises have been developed and shared between the Australian cohort and EMBL-EBI to address common challenges in bioinformatics training. The Australian trainer cohort undertook a train-the-trainer instructor course, again with EMBL-EBI, and subsequently successfully delivered train-the-trainer courses to interested bioinformatics trainers within Australia. We conclude that a train-the-trainer approach can help build national capacity and maintain a critical mass of trained instructors.

Indexed as

Capacity BuildingModels, OrganizationalAustraliaComputational BiologyHumans

Identifiers

PMID31246949
PMCPMC6597034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.