Evidence map›Paper›PMID 31246039›Full record

ArticleThe journal of physical chemistry letters2019

Monolayer Sensitivity Enables a 2D IR Spectroscopic Immuno-biosensor for Studying Protein Structures: Application to Amyloid Polymorphs.

Joshua S Ostrander, Justin P Lomont, Kacie L Rich, Vivek Saraswat, Benjamin R Feingold, Megan K Petti, Erin R Birdsall, Michael S Arnold, Martin T Zanni

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Increasing Pump-Probe Signal toward Asymptotic Limits.The journal of physical chemistry. B · 2023
    Review
  6. Review
  7. Review
  8. Protein Dynamics by Two-Dimensional Infrared Spectroscopy.Annual review of analytical chemistry (Palo Alto, Calif.) · 2021
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Joshua S OstranderDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0002-6338-6639
Justin P LomontDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0003-1106-3683
Kacie L RichDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0001-7371-9559
Vivek SaraswatDepartment of Materials Science and Engineering , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0001-5095-3078
Benjamin R FeingoldDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Megan K PettiDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0001-7381-9701
Erin R BirdsallDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Michael S ArnoldDepartment of Materials Science and Engineering , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0002-2946-5480
Martin T ZanniDepartment of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID http://orcid.org/0000-0001-7191-9768
University of Wisconsin–Madison · US

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
Structural mechanism of diabetic amyloid formationR01DK079895 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Martin T Zanni · 2008 to 2026
$7.7M
QExactive (Orbitrap) mass spectrometerS10OD020022 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI VESTLING, MARTHA M · 2015 to 2015
$483k
Examining Amyloid-β Structure During the Progression of Alzheimer’s Disease using an Immuno-2DIR-SensorR21AG061602 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI ZANNI, MARTIN T · 2019 to 2020
$409k
MALDI TOF/TOF Mass SpectrometerS10RR024601 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI GELLMAN, SAMUEL H. · 2008 to 2008
$376k
NCRR NIH HHS S10 RR024601NIA NIH HHS R21 AG061602NIDDK NIH HHS R01 DK079895NIGMS NIH HHS T32 GM008349NIH HHS S10 OD020022
6 · The paper itself

Abstract

Immunosensors use antibodies to detect and quantify biomarkers of disease, though the sensors often lack structural information. We create a surface-sensitive two-dimensional infrared (2D IR) spectroscopic immunosensor for studying protein structures. We tether antibodies to a plasmonic surface, flow over a solution of amyloid proteins, and measure the 2D IR spectra. The 2D IR spectra provide a global assessment of antigen structure, and isotopically labeled proteins give residue-specific structural information. We report the 2D IR spectra of fibrils and monomers using a polyclonal antibody that targets human islet amyloid polypeptide (hIAPP). We observe two fibrillar polymorphs differing in their structure at the G24 residue, which supports the hypothesis that hIAPP polymorphs form from a common oligomeric intermediate. This work provides insight into the structure of hIAPP, establishes a new method for studying protein structures using 2D IR spectroscopy, and creates a spectroscopic immunoassay applicable for studying a wide range of biomarkers.

Indexed as

Biosensing TechniquesAmyloidHumansIslet Amyloid PolypeptideProtein ConformationSpectrophotometry, InfraredAmyloidIslet Amyloid Polypeptide

Identifiers

PMID31246039
PMCPMC6823637
OpenAlexW2954077578

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.