ArticlePlant direct2018
Genomewide association study of ionomic traits on diverse soybean populations from germplasm collections.
Article in Plant direct, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 42 citations in OpenAlex.
- A comparative approach for selecting orthologous candidate genes in genome-wide association studies across multiple species.Plant physiology · 2026Article
- An atlas of plant selenium metabolism.The New phytologist · 2026Review
- Genetic control of the leaf ionome in pearl millet and correlation with root and agromorphological traits.PloS one · 2025Article
- Elemental sulfur concentration can be used as a rapid, reliable, and cost-effective predictor of sulfur amino acid content of soybean seeds.Scientific reports · 2024Article
- Climate change challenges, plant science solutions.The Plant cell · 2023Article
- Topological data analysis expands the genotype to phenotype map for 3D maize root system architecture.Frontiers in plant science · 2023Article
- Temporal and environmental factors interact with rootstock genotype to shape leaf elemental composition in grafted grapevines.Plant direct · 2022Article
- Recent advancement in OMICS approaches to enhance abiotic stress tolerance in legumes.Frontiers in plant science · 2022Review
- Review
- Genetic architecture of root and shoot ionomes in rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Ionomic Approaches for Discovery of Novel Stress-Resilient Genes in Plants.International journal of molecular sciences · 2021Review
- Multi-Locus GWAS for Grain Weight-Related Traits Under Rain-Fed Conditions in Common Wheat (Frontiers in plant science · 2021Article
- Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods.BMC plant biology · 2020Article
- Identification of loci controlling mineral element concentration in soybean seeds.BMC plant biology · 2020Article
- Identification of Novel Genomic Loci Associated with Soybean Shoot Tissue Macro- and Micronutrient Concentrations.The plant genome · 2018Article
- Genomewide association study of ionomic traits on diverse soybean populations from germplasm collections.Plant direct · 2018Article
Corrections and comments
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Authors and funding
6 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The elemental content of a soybean seed is a determined by both genetic and environmental factors and is an important component of its nutritional value. The elemental content is chemically stable, making the samples stored in germplasm repositories an intriguing source of experimental material. To test the efficacy of using samples from germplasm banks for gene discovery, we analyzed the elemental profile of seeds from 1,653 lines in the USDA Soybean Germplasm Collection. We observed large differences in the elemental profiles based on where the lines were grown, which lead us to break up the genetic analysis into multiple small experiments. Despite these challenges, we were able to identify candidate single nucleotide polymorphisms (SNPs) controlling elemental accumulation as well as lines with extreme elemental accumulation phenotypes. Our results suggest that elemental analysis of germplasm samples can identify SNPs in linkage disequilibrium to genes, which can be leveraged to assist in crop improvement efforts.
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