Evidence map›Paper›PMID 31243268›Full record

ArticleNature communications2019

Insights into real-time chemical processes in a calcium sensor protein-directed dynamic library.

Andrea Canal-Martín, Javier Sastre, María José Sánchez-Barrena, Angeles Canales, Sara Baldominos, Naiara Pascual, Loreto Martínez-González, Dolores Molero, Mª Encarnación Fernández-Valle, Elena Sáez and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. FDA Drug Repurposing Uncovers Modulators of Dopamine DJournal of medicinal chemistry · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Acylhydrazones and Their Biological Activity: A Review.Molecules (Basel, Switzerland) · 2022
    Review
  8. Article
  9. Article
  10. Dynamic Combinatorial Optimization ofJournal of medicinal chemistry · 2022
    Article
  11. Article
  12. Neuronal calcium sensor 1 (NCS1) dependent modulation of neuronal morphology and development.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. Dynamic Covalent Kinetic Resolution.Catalysis reviews, science and engineering · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Andrea Canal-MartínStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Javier SastreStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.ORCID http://orcid.org/0000-0002-1217-1558
María José Sánchez-BarrenaDepartment of Crystallography and Structural Biology, Instituto de Química Física Rocasolano, IQFR-CSIC, Madrid, 28006, Spain. xmjose@iqfr.csic.es.
Angeles CanalesOrganic Chemistry Department, Universidad Complutense de Madrid, Madrid, 28040, Spain.
Sara BaldominosStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Naiara PascualStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Loreto Martínez-GonzálezStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Dolores MoleroCAI de RMN, Universidad Complutense de Madrid, 28040, Madrid, Spain.
Mª Encarnación Fernández-ValleCAI de RMN, Universidad Complutense de Madrid, 28040, Madrid, Spain.
Elena SáezCAI de RMN, Universidad Complutense de Madrid, 28040, Madrid, Spain.
Patricia Blanco-GabellaDepartment of Crystallography and Structural Biology, Instituto de Química Física Rocasolano, IQFR-CSIC, Madrid, 28006, Spain.
Elena Gómez-RubioStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Sonsoles Martín-SantamaríaStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.
Almudena SáizInstituto Ramón y Cajal de Investigación Sanitaria. Ctra. Colmenar Viejo, km. 9100, 28034, Madrid, Spain.
Alicia MansillaInstituto Ramón y Cajal de Investigación Sanitaria. Ctra. Colmenar Viejo, km. 9100, 28034, Madrid, Spain. alicia.mansilla@salud.madrid.org.
F Javier CañadaStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.ORCID http://orcid.org/0000-0003-4462-1469
Jesús Jiménez-BarberoMolecular recognition and host-pathogen interactions, CIC bioGUNE, Derio, 48160, Bizkaia, Spain.
Ana MartínezStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain.ORCID http://orcid.org/0000-0002-2707-8110
Ruth Pérez-FernándezStructural and Chemical Biology Department, Centro de Investigaciones Biológicas, CIB-CSIC, Madrid, 28040, Spain. ruth.perez@csic.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dynamic combinatorial chemistry (DCC) has proven its potential in drug discovery speeding the identification of modulators of biological targets. However, the exchange chemistries typically take place under specific reaction conditions, with limited tools capable of operating under physiological parameters. Here we report a catalyzed protein-directed DCC working at low temperatures that allows the calcium sensor NCS-1 to find the best ligands in situ. Ultrafast NMR identifies the reaction intermediates of the acylhydrazone exchange, tracing the molecular assemblies and getting a real-time insight into the essence of DCC processes at physiological pH. Additionally, NMR, X-ray crystallography and computational methods are employed to elucidate structural and mechanistic aspects of the molecular recognition event. The DCC approach leads us to the identification of a compound stabilizing the NCS-1/Ric8a complex and whose therapeutic potential is proven in a Drosophila model of disease with synaptic alterations.

Indexed as

Gene LibraryAnimalsCalciumCatalysisCells, CulturedCombinatorial Chemistry TechniquesDrosophilaMagnetic Resonance ImagingMaleMembranes, ArtificialMiceNeuronal Calcium-Sensor ProteinsNeuronsPalmitoyl-CoA HydrolasePermeabilityProtein ConformationCalciumMembranes, ArtificialNeuronal Calcium-Sensor ProteinsPalmitoyl-CoA HydrolaseProteins

Identifiers

PMID31243268
PMCPMC6595003

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.