Evidence map›Paper›PMID 31243061›Full record

ArticleJournal of medical genetics2019

SMCHD1 mutation spectrum for facioscapulohumeral muscular dystrophy type 2 (FSHD2) and Bosma arhinia microphthalmia syndrome (BAMS) reveals disease-specific localisation of variants in the ATPase domain.

Richard J L F Lemmers, Nienke van der Stoep, Patrick J van der Vliet, Steven A Moore, David San Leon Granado, Katherine Johnson, Ana Topf, Volker Straub, Teresinha Evangelista, Tahseen Mozaffar and 10 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medical genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

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  13. Chromosome 10q-linked FSHD identifiesJournal of medical genetics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 5 countries.

Richard J L F LemmersHuman Genetics, Leids Universitair Medisch Centrum, Leiden, The Netherlands r.j.l.f.lemmers@lumc.nl.ORCID 0000-0002-7102-710X
Nienke van der StoepDepartment of Clinical Genetics, Laboratory for Diagnostic Genome Analysis, Leids Universitair Medisch Centrum, Leiden, The Netherlands.
Patrick J van der VlietHuman Genetics, Leids Universitair Medisch Centrum, Leiden, The Netherlands.
Steven A MooreDepartment of Pathology, University of Iowa, Iowa City, Iowa, USA.
David San Leon GranadoHuman Genetics, Leids Universitair Medisch Centrum, Leiden, The Netherlands.
Katherine JohnsonJohn Walton Muscular Dystrophy Research Centre, Newcastle University, Newcastle upon Tyne, UK.
Ana TopfJohn Walton Muscular Dystrophy Research Centre, Newcastle University, Newcastle upon Tyne, UK.
Volker StraubJohn Walton Muscular Dystrophy Research Centre, Newcastle University, Newcastle upon Tyne, UK.
Teresinha EvangelistaUnité de Morphologie Neuromusculaire, Institut de Myologie, Paris, France.
Tahseen MozaffarDepartment of Neurology, University of California Irvine, Irvine, California, USA.
Virginia KimonisDepartment of Pediatrics, University of California, Irvine, Irvine, California, USA.ORCID 0000-0003-1567-4449
Natalie D ShawResearch Triangle Park, Research Triangle Park, NC, USA.
Rita SelvaticiDepartment of Medical Sciences; Medical Genetics Unit, University of Ferrara, Ferrara, Italy.
Alessandra FerliniDipartimento di Medicina Sperimentale e Diagnostica, Università di Ferrara, Ferrara, Italy.
Nicol VoermansDepartment of Neurology, Radboudumc, Nijmegen, Gelderland, The Netherlands.
Baziel van EngelenDepartment of Neurology, Radboudumc, Nijmegen, Gelderland, The Netherlands.
Sabrina SacconiCentre de Référence Maladies Neuromusculaires, Hôpital Archet, Nice, France.
Rabi TawilDepartment of Neurology, University of Rochester Medical Center, Rochester, New York, USA.
Meindert LamersDepartment of Cell and Chemical Biology, Leiden Universitair Medisch Centrum, Leiden, The Netherlands.
Silvère M van der MaarelHuman Genetics, Leids Universitair Medisch Centrum, Leiden, The Netherlands.
Leiden University Medical Center · NLMuscular Dystrophy UK · GBRadboud University Nijmegen · NLUniversity of California, Irvine · USUniversity of Ferrara · ITHôpital l'Archet · FRInstitut de Myologie · FRTriangle · USUniversity of Iowa · USUniversity of Rochester Medical Center · US

Funding

Therapeutic Potential of ESC-Derived Myogenic PrecursorsU54NS053672 · NINDS · UNIVERSITY OF IOWA · PI CAMPBELL, KEVIN P. · 2005 to 2019
$22.0M
Investigation of the genetic architecture and phenotypic spectrum of Bosma arhinia microphthalmia syndromeZIAES103327 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SHAW, NATALIE · 2017 to 2025
$15.5M
The Pathogenesis of Facioscapulohumeral Muscular DystrophyP01NS069539 · NINDS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TAPSCOTT, STEPHEN J · 2010 to 2019
$12.3M
Muscular Dystrophy Specialized Research Center: Project 2P50NS053672 · NINDS · UNIVERSITY OF IOWA · PI KEVIN P. CAMPBELL · 2020 to 2026
$11.9M
MYOTONIC DYSTROPHY LOCUS CONTROLR01AR045203 · NIAMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TAPSCOTT, STEPHEN J · 1998 to 2025
$9.4M
SMCHD1 Pathways as Candidate Targets for FSHDR01AR066248 · NIAMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TAPSCOTT, STEPHEN J · 2014 to 2024
$4.5M
NIAMS NIH HHS R01 AR045203NIAMS NIH HHS R01 AR066248NIEHS NIH HHS ZIA ES103327NINDS NIH HHS P01 NS069539NINDS NIH HHS P50 NS053672NINDS NIH HHS U54 NS053672
6 · The paper itself

Abstract

backgroundVariants in the Structural Maintenance of Chromosomes flexible Hinge Domain-containing protein 1 (

methodsExamination of

results

conclusionsThe localisation of missense variants within the ATPase domain of SMCHD1 may contribute to the differences in phenotypic outcome.

Indexed as

Adenosine TriphosphatasesChoanal AtresiaChromosomal Proteins, Non-HistoneDNA MethylationFemaleGenetic VariationHumansMaleMicrophthalmosMuscular Dystrophy, FacioscapulohumeralMutationMutation, MissenseNoseProtein DomainsAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneSMCHD1 protein, humanATPase domainBAMSD4Z4DUX4FSHDmutation spectrumSMCHD1

Identifiers

PMID31243061
PMCPMC6800092
OpenAlexW2956050112

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.