Evidence map›Paper›PMID 31242080›Full record

ArticleAutophagy2020

Upregulation of ATG7 attenuates motor neuron dysfunction associated with depletion of TARDBP/TDP-43.

Aneesh Donde, Mingkuan Sun, Yun Ha Jeong, Xinrui Wen, Jonathan Ling, Sophie Lin, Kerstin Braunstein, Shuke Nie, Sheng Wang, Liam Chen and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. BLOC1S1 Attenuates B. Melitensis 16M LPS-Triggered Autophagy by Spatial Confinement of TDP-43.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  5. Review
  6. Molecular mechanism on autophagy associated cardiovascular dysfunction inFrontiers in cell and developmental biology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Frontiers in neuroscience · 2023
    Review
  14. Article
  15. Review
  16. Where and Why Modeling Amyotrophic Lateral Sclerosis.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 2 countries.

Aneesh DondeDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0002-0917-9436
Mingkuan SunDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0002-4511-5894
Yun Ha JeongDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Xinrui WenDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0003-2667-2983
Jonathan LingDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0003-1927-9729
Sophie LinDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Kerstin BraunsteinDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Shuke NieDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Sheng WangDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0002-5625-403X
Liam ChenDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Philip C WongDepartments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Johns Hopkins University · US

Funding

Research Education ComponentP30AG066507 · NIA · JOHNS HOPKINS UNIVERSITY · PI Corinne Pettigrew · 2020 to 2026
$29.3M
ROLE OF COPPER CHAPERONE FOR SOD1 IN MODELS OF ALSR01NS040014 · NINDS · JOHNS HOPKINS UNIVERSITY · PI WONG, PHILIP C · 2000 to 2011
$3.2M
NIA NIH HHS P30 AG066507NINDS NIH HHS R01 NS040014
6 · The paper itself

Abstract

A shared neuropathological hallmark in amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) is nuclear clearance and cytoplasmic aggregation of TARDBP/TDP-43 (TAR DNA binding protein). We previously showed that the ability of TARDBP to repress nonconserved cryptic exons was impaired in brains of patients with ALS and FTD, suggesting that its nuclear depletion contributes to neurodegeneration. However, the critical pathways impacted by the failure to repress cryptic exons that may contribute to neurodegeneration remain undefined. Here, we report that transcriptome analysis of TARDBP-deficient neurons revealed downregulation of

Indexed as

AnimalsAutophagyAutophagy-Related Protein 7BrainDNA-Binding ProteinsHumansMice, TransgenicMotor NeuronsUp-RegulationATG7 protein, humanAtg7 protein, mouseAutophagy-Related Protein 7DNA-Binding ProteinsTARDBP protein, humanTardbp protein, mouseALSATG7autophagyDrosophilafrontotemporal dementiamouseSQSTM1/p62TARDBP/TDP-43

Identifiers

PMID31242080
PMCPMC7138241
OpenAlexW2954465031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.