ArticleThe ISME journal2019
Virome heterogeneity and connectivity in waterfowl and shorebird communities.
Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
54 citing papers in PubMed, 113 citations in OpenAlex.
- Novel avian calicivirus genome with type IV internal ribosomal entry site (IRES) in black-headed gull (Chroicocephalus ridibundus) in Hungary.Archives of virology · 2026Article
- Exposure Without Active Infection: Surveillance of Influenza A Viruses and Coronaviruses in Antarctic Seabirds.Viruses · 2026Article
- Core virome shapes adaptation of a phytopathogenic fungus to climate and cropping patterns.The ISME journal · 2026Article
- RNA-viromics unveils diverse RNA viral communities in Large-billed crows and Northern Ravens.Virus genes · 2025Article
- RNA virome of ticks and fleas infesting Marmota himalayana from the Qinghai-Tibet plateau.Animal microbiome · 2025Article
- Anthropogenic Factors and Social Organisation Drive Picobirnavirus Communities in Wild Rhesus Macaques.Ecology and evolution · 2025Article
- Opportunistic sampling from the near-threatened Alexandrine parakeet uncovers genomes of a novel parvovirus and beak and feather disease virus.Australian veterinary journal · 2025Article
- Virome analysis suggests deltacoronaviruses and picornaviruses as a probable cause of severe intestinal disease on three quail farms.Animal microbiome · 2025Article
- The dynamics of microbiome and virome in migratory birds of southwest China.NPJ biofilms and microbiomes · 2025Article
- Detection of Coronaviruses and Genomic Characterization of Gammacoronaviruses from Overwintering Black-Headed Gulls (Microorganisms · 2025Article
- Making sense of the virome in light of evolution and ecology.Proceedings. Biological sciences · 2025Review
- Avian Migration-Mediated Transmission and Recombination Driving the Diversity of Gammacoronaviruses and Deltacoronaviruses.Molecular biology and evolution · 2025Article
- The Spleen Virome of Australia's Endemic Platypus Is Dominated by Highly Diverse Papillomaviruses.Viruses · 2025Article
- Metatranscriptomic analysis of the gut virome in Muscovy ducks reveals a novel duck reovirus potentially associated with hepatic and splenic hemorrhage.Frontiers in immunology · 2025Article
- Article
- Translation of Overlapping Open Reading Frames Promoted by Type 2 IRESs in Avian Calicivirus Genomes.Viruses · 2024Article
- Article
- Genetic characterization of the first Deltacoronavirus from wild birds around Qinghai Lake.Frontiers in microbiology · 2024Article
- The diverse liver viromes of Australian geckos and skinks are dominated by hepaciviruses and picornaviruses and reflect host taxonomy and habitat.Virus evolution · 2024Article
- Emerging and Novel Viruses in Passerine Birds.Microorganisms · 2023Review
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
Abstract
Models of host-microbe dynamics typically assume a single-host population infected by a single pathogen. In reality, many hosts form multi-species aggregations and may be infected with an assemblage of pathogens. We used a meta-transcriptomic approach to characterize the viromes of nine avian species in the Anseriformes (ducks) and Charadriiformes (shorebirds). This revealed the presence of 27 viral species, of which 24 were novel, including double-stranded RNA viruses (Picobirnaviridae and Reoviridae), single-stranded RNA viruses (Astroviridae, Caliciviridae, Picornaviridae), a retro-transcribing DNA virus (Hepadnaviridae), and a single-stranded DNA virus (Parvoviridae). These viruses comprise multi-host generalist viruses and those that are host-specific, indicative of both virome connectivity (host sharing) and heterogeneity (host specificity). Virome connectivity was apparent in two well described multi-host virus species -avian coronavirus and influenza A virus- and a novel Rotavirus species that were shared among some Anseriform species, while virome heterogeneity was reflected in the absence of viruses shared between Anseriformes and Charadriiformes, as well as differences in viral abundance and alpha diversity among species. Overall, we demonstrate complex virome structures across host species that co-exist in multi-species aggregations.
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