Evidence map›Paper›PMID 31239506›Full record

ArticleScientific reports2019

Live imaging of Aiptasia larvae, a model system for coral and anemone bleaching, using a simple microfluidic device.

Will Van Treuren, Kara K Brower, Louai Labanieh, Daniel Hunt, Sarah Lensch, Bianca Cruz, Heather N Cartwright, Cawa Tran, Polly M Fordyce

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Live imaging of echinoderm embryos to illuminate evo-devo.Frontiers in cell and developmental biology · 2022
    Article
  4. Article
  5. Article
  6. Review
  7. Parasitology · 2020
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Will Van TreurenDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, 94305, USA.
Kara K BrowerDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Louai LabaniehDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Daniel HuntDepartment of Chemical Engineering, Stanford University, Stanford, CA, 94305, USA.
Sarah LenschDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Bianca CruzDepartment of Physics, California State Polytechnic University, Pomona, CA, 91768, USA.
Heather N CartwrightDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0001-6639-5808
Cawa TranDepartment of Genetics, Stanford University, Stanford, CA, 94305, USA. ctran29@csuchico.edu.ORCID http://orcid.org/0000-0002-6776-4780
Polly M FordyceDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA. pfordyce@stanford.edu.ORCID http://orcid.org/0000-0002-9505-0638
Stanford University · USCarnegie Institution for Science · USCalifornia State Polytechnic University · USCalifornia State University, Chico · USCardiovascular Institute of the South · US

Funding

Stanford Chem-H Chemistry/Biology Interface Predoctoral Training ProgramT32GM120007 · NIGMS · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN · 2016 to 2020
$1.2M
NIGMS NIH HHS T32 GM120007
6 · The paper itself

Abstract

Coral reefs, and their associated diverse ecosystems, are of enormous ecological importance. In recent years, coral health has been severely impacted by environmental stressors brought on by human activity and climate change, threatening the extinction of several major reef ecosystems. Reef damage is mediated by a process called 'coral bleaching' where corals, sea anemones, and other cnidarians lose their photosynthetic algal symbionts (family Symbiodiniaceae) upon stress induction, resulting in drastically decreased host energy harvest and, ultimately, coral death. The mechanism by which this critical cnidarian-algal symbiosis is lost remains poorly understood. The larvae of the sea anemone, Exaiptasia pallida (commonly referred to as 'Aiptasia') are an attractive model organism to study this process, but they are large (∼100 mm in length, ∼75 mm in diameter), deformable, and highly motile, complicating long-term imaging and limiting study of this critical endosymbiotic relationship in live organisms. Here, we report 'Traptasia', a simple microfluidic device with multiple traps designed to isolate and image individual, live larvae of Aiptasia and their algal symbionts over extended time courses. Using a trap design parameterized via fluid flow simulations and polymer bead loading tests, we trapped Aiptasia larvae containing algal symbionts and demonstrated stable imaging for >10 hours. We visualized algae within Aiptasia larvae and observed algal expulsion under an environmental stressor. To our knowledge, this device is the first to enable time-lapsed, high-throughput live imaging of cnidarian larvae and their algal symbionts and, in further implementation, could provide important insights into the cellular mechanisms of cnidarian bleaching under different environmental stressors. The 'Traptasia' device is simple to use, requires minimal external equipment and no specialized training to operate, and can easily be adapted using the trap optimization data presented here to study a variety of large, motile organisms.

Indexed as

Lab-On-A-Chip DevicesModels, BiologicalPhotosynthesisSymbiosisAnimalsAnthozoaClimate ChangeEcosystemLarvaMolecular ImagingSea Anemones

Identifiers

PMID31239506
PMCPMC6592900
OpenAlexW2953774674

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.