Evidence map›Paper›PMID 31239482›Full record

ArticleScientific reports2019

Terpene Synthase Genes Originated from Bacteria through Horizontal Gene Transfer Contribute to Terpenoid Diversity in Fungi.

Qidong Jia, Xinlu Chen, Tobias G Köllner, Jan Rinkel, Jianyu Fu, Jessy Labbé, Wangdan Xiong, Jeroen S Dickschat, Jonathan Gershenzon, Feng Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Canonical terpene synthases in arthropods: Intraphylum gene transfer.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Review
  7. Article
  8. Systematic metabolic engineering ofFrontiers in bioengineering and biotechnology · 2024
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  9. Article
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  11. Review
  12. Beneficial bacterial-Frontiers in microbiology · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Fungal evolution: cellular, genomic and metabolic complexity.Biological reviews of the Cambridge Philosophical Society · 2020
    Article
  17. Article
  18. Origin and Evolution of Polycyclic Triterpene Synthesis.Molecular biology and evolution · 2020
    Article
  19. Article
  20. Mechanistic Studies on Trichoacorenol Synthase from Amycolatopsis benzoatilytica.Chembiochem : a European journal of chemical biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Qidong JiaGraduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN, 37996, USA. qjia2@vols.utk.edu.
Xinlu ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, 37996, USA.ORCID http://orcid.org/0000-0002-7560-6125
Tobias G KöllnerMax Planck Institute for Chemical Ecology, Hans-Knoell-Strasse 8, D-07745, Jena, Germany.ORCID http://orcid.org/0000-0002-7037-904X
Jan RinkelKekulé-Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Straße 1, 53121, Bonn, Germany.
Jianyu FuTea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China.
Jessy LabbéGraduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN, 37996, USA.ORCID http://orcid.org/0000-0003-0368-2054
Wangdan XiongDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, 37996, USA.
Jeroen S DickschatKekulé-Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Straße 1, 53121, Bonn, Germany.
Jonathan GershenzonMax Planck Institute for Chemical Ecology, Hans-Knoell-Strasse 8, D-07745, Jena, Germany.
Feng ChenGraduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN, 37996, USA. fengc@utk.edu.ORCID http://orcid.org/0000-0002-3267-4646
University of Tennessee at Knoxville · USMax Planck Institute for Chemical Ecology · DEUniversity of Bonn · DEChinese Academy of Agricultural Sciences · CNOak Ridge National Laboratory · USUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungi are successful eukaryotes of wide distribution. They are known as rich producers of secondary metabolites, especially terpenoids, which are important for fungi-environment interactions. Horizontal gene transfer (HGT) is an important mechanism contributing to genetic innovation of fungi. However, it remains unclear whether HGT has played a role in creating the enormous chemical diversity of fungal terpenoids. Here we report that fungi have acquired terpene synthase genes (TPSs), which encode pivotal enzymes for terpenoid biosynthesis, from bacteria through HGT. Phylogenetic analysis placed the majority of fungal and bacterial TPS genes from diverse taxa into two clades, indicating ancient divergence. Nested in the bacterial TPS clade is a number of fungal TPS genes that are inferred as the outcome of HGT. These include a monophyletic clade of nine fungal TPS genes, designated as BTPSL for bacterial TPS-like genes, from eight species of related entomopathogenic fungi, including seven TPSs from six species in the genus Metarhizium. In vitro enzyme assays demonstrate that all seven BTPSL genes from the genus Metarhizium encode active enzymes with sesquiterpene synthase activities of two general product profiles. By analyzing the catalytic activity of two resurrected ancestral BTPSLs and one closely related bacterial TPS, the trajectory of functional evolution of BTPSLs after HGT from bacteria to fungi and functional divergence within Metarhizium could be traced. Using M. brunneum as a model species, both BTPSLs and typical fungal TPSs were demonstrated to be involved in the in vivo production of terpenoids, illustrating the general importance of HGT of TPS genes from bacteria as a mechanism contributing to terpenoid diversity in fungi.

Indexed as

Gene Transfer, HorizontalAlkyl and Aryl TransferasesBacteriaBiocatalysisGenome, FungalHypocrealesPhylogenyTerpenesAlkyl and Aryl TransferasesTerpenesterpene synthase

Identifiers

PMID31239482
PMCPMC6592883
OpenAlexW2954963193

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.