Evidence map›Paper›PMID 31236845›Full record

ArticlePlant molecular biology2019

Glycine rich proline rich protein from Sorghum bicolor serves as an antimicrobial protein implicated in plant defense response.

Tanmoy Halder, Gouranga Upadhyaya, Shuddhanjali Roy, Ria Biswas, Arup Das, Angshuman Bagchi, Tanushree Agarwal, Sudipta Ray

Erratum issuedAbstract read
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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Investigating theFrontiers in cellular and infection microbiology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tanmoy HalderPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Gouranga UpadhyayaPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Shuddhanjali RoyPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Ria BiswasDepartment of Biochemistry and Biophysics, University of Kalyani, Nadia, West Bengal, 741235, India.
Arup DasPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Angshuman BagchiDepartment of Biochemistry and Biophysics, University of Kalyani, Nadia, West Bengal, 741235, India.
Tanushree AgarwalPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
Sudipta RayPlant Functional Genomics Laboratory, Department of Botany, University of Calcutta, 35 Ballygunge Circular Road, Kolkata, West Bengal, 700019, India. srbot@caluniv.ac.in.ORCID http://orcid.org/0000-0003-3889-0136
University of Calcutta · INUniversity of Kalyani · IN

Funding

Council of Scientific and Industrial Research 38(1402)/15/EMR-II dated 14.08.2015
6 · The paper itself

Abstract

key messageSorghum glycine rich proline rich protein (SbGPRP1) exhibit antimicrobial properties and play a crucial role during biotic stress condition. Several proteins in plants build up the innate immune response system in plants which get triggered during the occurrence of biotic stress. Here we report the functional characterization of a glycine-rich proline-rich protein (SbGPRP1) from Sorghum which was previously demonstrated to be involved in abiotic stresses. Expression studies carried out with SbGPRP1 showed induced expression upon application of phytohormones like salicylic acid which might be the key in fine-tuning the expression level. Upon challenging the Sorghum plants with a compatible pathogen the SbGprp1 transcript was found to be upregulated. SbGPRP1 encodes a 197 amino acid polypeptide which was bacterially-expressed and purified for in vitro assays. Gram-positive bacteria like Bacillus and phytopathogen Rhodococcus fascians showed inhibited growth in the presence of the protein. The NPN assay, electrolytic leakage and SEM analysis showed membrane damage in bacterial cells. Ectopic expression of SbGPRP1 in tobacco plants led to enhanced tolerance towards infection caused by R. fascians. Though the N-terminal part of the protein showed disorderness the C-terminal end was quite capable of forming several α-helices which was correlated with CD spectroscopic analysis. Here, we have tried to determine the structural model for the protein and predicted the association of antimicrobial activity with the C-terminal region of the protein.

Indexed as

Anti-Infective AgentsBacillusEctopic Gene ExpressionGlycineNicotianaPhylogenyPlant DiseasesPlant Growth RegulatorsPlant ProteinsProlineRhodococcusSalicylic AcidSorghumStress, PhysiologicalAnti-Infective AgentsGlycinePlant Growth RegulatorsPlant ProteinsProlineSalicylic AcidAntimicrobial peptideBiotic stressGlycine-rich proline-rich proteinRhodococcus fasciansScanning electron microscopyTransgenic plant

Identifiers

PMID31236845
OpenAlexW2955288280

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.