Evidence map›Paper›PMID 31235934›Full record

ArticleNature cell biology2019

Whsc1 links pluripotency exit with mesendoderm specification.

Tian V Tian, Bruno Di Stefano, Grégoire Stik, Maria Vila-Casadesús, José Luis Sardina, Enrique Vidal, Alessandro Dasti, Carolina Segura-Morales, Luisa De Andrés-Aguayo, Antonio Gómez and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. SEC Mediates mAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  5. Many faces of mammalian NSD methyltransferases.Cellular & molecular biology letters · 2026
    Review
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  14. SIRT7 and p53 interaction in embryonic development and tumorigenesis.Frontiers in cell and developmental biology · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Tian V TianCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain. tian.tian@crg.eu.ORCID http://orcid.org/0000-0002-9906-0980
Bruno Di StefanoCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID http://orcid.org/0000-0003-2532-3087
Grégoire StikCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
Maria Vila-CasadesúsCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
José Luis SardinaCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
Enrique VidalCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID http://orcid.org/0000-0002-4217-1807
Alessandro DastiCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
Carolina Segura-MoralesCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID http://orcid.org/0000-0002-1746-6865
Luisa De Andrés-AguayoCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
Antonio GómezCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID http://orcid.org/0000-0001-5308-981X
Johanna GoldmannCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.
Rudolf JaenischThe Whitehead Institute for Biomedical Research, Cambridge, MA, USA.
Thomas GrafCenter for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain. thomas.graf@crg.eu.ORCID http://orcid.org/0000-0003-2774-4117
Centre for Genomic Regulation · ESHarvard University · USUniversitat Pompeu Fabra · ESWhitehead Institute for Biomedical Research · US

Funding

Transcriptional condensates, epigenetic editing and Rett SyndromeR01MH104610 · NIMH · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF, YOUNG, RICHARD · 2014 to 2023
$7.4M
An iPSC based platform for functionally assessing genetic and environmental riskR01NS088538 · NINDS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF, MYERS, RICHARD H · 2014 to 2018
$5.0M
NIMH NIH HHS R01 MH104610NINDS NIH HHS R01 NS088538
6 · The paper itself

Abstract

How pluripotent stem cells differentiate into the main germ layers is a key question of developmental biology. Here, we show that the chromatin-related factor Whsc1 (also known as Nsd2 and MMSET) has a dual role in pluripotency exit and germ layer specification of embryonic stem cells. On induction of differentiation, a proportion of Whsc1-depleted embryonic stem cells remain entrapped in a pluripotent state and fail to form mesendoderm, although they are still capable of generating neuroectoderm. These functions of Whsc1 are independent of its methyltransferase activity. Whsc1 binds to enhancers of the mesendodermal regulators Gata4, T (Brachyury), Gata6 and Foxa2, together with Brd4, and activates the expression of these genes. Depleting each of these regulators also delays pluripotency exit, suggesting that they mediate the effects observed with Whsc1. Our data indicate that Whsc1 links silencing of the pluripotency regulatory network with activation of mesendoderm lineages.

Indexed as

AnimalsCell DifferentiationCell LineageEmbryonic Stem CellsEndodermGerm LayersHistone-Lysine N-MethyltransferaseMiceNeural PlateNuclear ProteinsPluripotent Stem CellsTranscription FactorsHistone-Lysine N-MethyltransferaseNuclear ProteinsTranscription FactorsWHSC1 protein, mouse

Identifiers

PMID31235934
PMCPMC8020485
OpenAlexW2951674772

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.