Evidence map›Paper›PMID 31235911›Full record

ArticleNature structural & molecular biology2019

Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.

Na Wang, Christophe Bosc, Sung Ryul Choi, Benoit Boulan, Leticia Peris, Natacha Olieric, Hongyu Bao, Fatma Krichen, Liu Chen, Annie Andrieux and 4 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 56 citations in OpenAlex.

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  13. Targeting Vasohibins to Promote Axon Regeneration.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Na WangDepartment of Biology, Southern University of Science and Technology, Shenzhen, China.
Christophe BoscGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France.ORCID http://orcid.org/0000-0002-3195-6692
Sung Ryul ChoiLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institut, Villigen PSI, Switzerland.
Benoit BoulanGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France.ORCID http://orcid.org/0000-0001-6793-5378
Leticia PerisGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France.ORCID http://orcid.org/0000-0002-0668-1252
Natacha OliericLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institut, Villigen PSI, Switzerland.
Hongyu BaoDepartment of Biology, Southern University of Science and Technology, Shenzhen, China.
Fatma KrichenGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France.ORCID http://orcid.org/0000-0003-0212-0463
Liu ChenDepartment of Biology, Southern University of Science and Technology, Shenzhen, China.
Annie AndrieuxGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France.ORCID http://orcid.org/0000-0002-4022-6405
Vincent OliericLaboratory for Macromolecules and Bioimaging, Photon Science Division, Paul Scherrer Institut, Villigen PSI, Switzerland.ORCID http://orcid.org/0000-0002-0533-7222
Marie-Jo MoutinGrenoble Institut Neurosciences, University Grenoble Alpes, Inserm, U1216, CNRS, CEA, Grenoble, France, Grenoble, France. moutinm@univ-grenoble-alpes.fr.ORCID http://orcid.org/0000-0003-2681-9818
Michel O SteinmetzLaboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institut, Villigen PSI, Switzerland. michel.steinmetz@psi.ch.ORCID http://orcid.org/0000-0001-6157-3687
Hongda HuangDepartment of Biology, Southern University of Science and Technology, Shenzhen, China. huanghd@sustc.edu.cn.ORCID http://orcid.org/0000-0001-6741-7677
Centre National de la Recherche Scientifique · FRSouthern University of Science and Technology · CNPaul Scherrer Institute · CHUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vasohibins are tubulin tyrosine carboxypeptidases that are important in neuron physiology. We examined the crystal structures of human vasohibin 1 and 2 in complex with small vasohibin-binding protein (SVBP) in the absence and presence of different inhibitors and a C-terminal α-tubulin peptide. In combination with functional data, we propose that SVBP acts as an activator of vasohibins. An extended groove and a distinctive surface residue patch of vasohibins define the specific determinants for recognizing and cleaving the C-terminal tyrosine of α-tubulin and for binding microtubules, respectively. The vasohibin-SVBP interaction and the ability of the enzyme complex to associate with microtubules regulate axon specification of neurons. Our results define the structural basis of tubulin detyrosination by vasohibins and show the relevance of this process for neuronal development. Our findings offer a unique platform for developing drugs against human conditions with abnormal tubulin tyrosination levels, such as cancer, heart defects and possibly brain disorders.

Indexed as

Angiogenic ProteinsAnimalsCarrier ProteinsCell Cycle ProteinsCells, CulturedCrystallography, X-RayHEK293 CellsHumansMiceModels, MolecularProtein ConformationProtein Interaction MapsTubulinAngiogenic ProteinsCarrier ProteinsCell Cycle ProteinsSVBP protein, humanTubulintyrosine-tubulinVASH1 protein, humanVASH2 protein, human

Identifiers

PMID31235911
OpenAlexW2952324971

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.