Evidence map›Paper›PMID 31235519›Full record

ArticleThe Journal of biological chemistry2019

Substrate selectivity in starch polysaccharide monooxygenases.

Van V Vu, John A Hangasky, Tyler C Detomasi, Skylar J W Henry, Son Tung Ngo, Elise A Span, Michael A Marletta

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  7. Novel Design of an α-Amylase with an N-Terminal CBM20 inMolecules (Basel, Switzerland) · 2023
    Article
  8. Characterization of a unique polysaccharide monooxygenase from the plant pathogenProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Modulation of ASIC1a by reactive oxygen species through JFK signaling.International journal of physiology, pathophysiology and pharmacology · 2022
    Article
  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Van V VuNguyen Tat Thanh Hi-Tech Institute, Nguyen Tat Thanh University, Ho Chi Minh City 70000, Vietnam. Electronic address: vanvu@ntt.edu.vn.
John A HangaskyCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, California 94720.
Tyler C DetomasiDepartment of Chemistry, University of California, Berkeley, California 94720.
Skylar J W HenryDepartment of Molecular and Cell Biology, University of California, Berkeley, California 94720.
Son Tung NgoLaboratory of Theoretical and Computational Biophysics, Ton Duc Thang University, Ho Chi Minh City 758307, Vietnam; Faculty of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 758307, Vietnam.
Elise A SpanBiophysics Graduate Group, University of California, Berkeley, California 94720.
Michael A MarlettaCalifornia Institute for Quantitative Biosciences, University of California, Berkeley, California 94720; Department of Chemistry, University of California, Berkeley, California 94720; Department of Molecular and Cell Biology, University of California, Berkeley, California 94720. Electronic address: marletta@berkeley.edu.
University of California, Berkeley · USQB3 · USTon Duc Thang University · VNTrường ĐH Nguyễn Tất Thành · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Degradation of polysaccharides is central to numerous biological and industrial processes. Starch-active polysaccharide monooxygenases (AA13 PMOs) oxidatively degrade starch and can potentially be used with industrial amylases to convert starch into a fermentable carbohydrate. The oxidative activities of the starch-active PMOs from the fungi

Indexed as

AmyloseBinding SitesCatalytic DomainFungal ProteinsMixed Function OxygenasesMolecular Docking SimulationNeurospora crassaOxidation-ReductionProtein Conformation, alpha-HelicalSordarialesStarchSubstrate SpecificityAmyloseFungal ProteinsMixed Function OxygenasesStarchamyloseauxiliary activity (AA) enzymecarbohydrate-binding proteincoppercopper monooxygenasemetalloproteinoxygenasepolysaccharidepolysaccharide monooxygenasestarch

Identifiers

PMID31235519
PMCPMC6690692
OpenAlexW2954288046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.