Evidence map›Paper›PMID 31233532›Full record

ArticlePloS one2019

Biochemical characterization of the Helicobacter pylori bactofilin-homolog HP1542.

Sven Holtrup, Thomas Heimerl, Uwe Linne, Florian Altegoer, Frank Noll, Barbara Waidner

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Distinct regions ofeLife · 2022
    Article
  5. Article
  6. Insights Into the Helical Shape Complex ofFrontiers in microbiology · 2022
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sven HoltrupLOEWE Center for Synthetic Microbiology, Philipps-Universität, Marburg, Germany.
Thomas HeimerlLOEWE Center for Synthetic Microbiology, Philipps-Universität, Marburg, Germany.
Uwe LinneFaculty of Chemistry, Philipps-Universität, Marburg, Germany.
Florian AltegoerLOEWE Center for Synthetic Microbiology, Philipps-Universität, Marburg, Germany.
Frank NollFaculty of Chemistry, Philipps-Universität, Marburg, Germany.
Barbara WaidnerLOEWE Center for Synthetic Microbiology, Philipps-Universität, Marburg, Germany.ORCID 0000-0002-5978-2188

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human pathogen Helicobacter pylori is known for its colonization of the upper digestive system, where it escapes the harsh acidic environment by hiding in the mucus layer. One factor promoting this colonization is the helical cell shape of H. pylori. Among shape determining proteins are cytoskeletal elements like the recently discovered bactofilins. Bactofilins constitute a widespread family of polymer-forming bacterial proteins whose biology is still poorly investigated. Here we describe the first biochemical analysis of the bactofilin HP1542 of H. pylori reference strain 26695. Purified HP1542 forms sheet-like 2D crystalline assemblies, which clearly depend on a natively structured C-terminus. Polymerization properties and protein stability were investigated. Additionally, we also could demarcate HP1542 from amyloid proteins that share similarities with the bactofilin DUF domain. By using zonal centrifugation of total H. pylori cell lysates and immunfluorescence analysis we revealed peripheral membrane association of HP1542 mostly pronounced near mid-cell. Interestingly our results indicate that H. pylori bactofilin does not contribute to cell wall stability. This study might act as a starting point for biophysical studies of the H. pylori bactofilin biology as well as for the investigation of bactofilin cell physiology in this organism. Importantly, this study is the first biochemical analysis of a bactofilin in a human pathogen.

Indexed as

Biochemical PhenomenaBacterial ProteinsCell WallHelicobacter pyloriModels, MolecularProtein BindingProtein ConformationRecombinant ProteinsSpectrum AnalysisStructure-Activity RelationshipBacterial ProteinsRecombinant Proteins

Identifiers

PMID31233532
PMCPMC6590870

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.