Evidence map›Paper›PMID 31231053›Full record

ArticleCurrent biology : CB2019

Immediate Dosage Compensation Is Triggered by the Deletion of Y-Linked Genes in Silene latifolia.

Marc Krasovec, Yusuke Kazama, Kotaro Ishii, Tomoko Abe, Dmitry A Filatov

Open access · hybridAbstract read
In one paragraph

Article in Current biology : CB, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
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  6. Sex Chromosome Evolution: Hallmarks and Question Marks.Molecular biology and evolution · 2024
    Review
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  9. Article
  10. Evolution of sex-determination in dioecious plants: From active Y to X/A balance?BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  11. Article
  12. Article
  13. Dosage compensation evolution in plants: theories, controversies and mechanisms.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  14. Epigenetics drive the evolution of sex chromosomes in animals and plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Marc KrasovecDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK.
Yusuke KazamaRIKEN Nishina Center for Accelerator-Based Sciences, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
Kotaro IshiiRIKEN Nishina Center for Accelerator-Based Sciences, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
Tomoko AbeRIKEN Nishina Center for Accelerator-Based Sciences, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
Dmitry A FilatovDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK. Electronic address: dmitry.filatov@plants.ox.ac.uk.
RIKEN Nishina Center · JPUniversity of Oxford · GB

Funding

Biotechnology and Biological Sciences Research Council BB/P009808/1Wellcome Trust
6 · The paper itself

Abstract

The loss of functional genes from non-recombining sex-specific chromosomes [1, 2], such as the Y chromosomes in mammals [3] or W chromosomes in birds [4], should result in an imbalance of gene products for sex-linked genes [5]. Different chromosome-wide systems that rebalance gene expression are known to operate in organisms with relatively old sex chromosomes [6]; e.g., Drosophila overexpress X-linked genes in males [7], while mammals shut down one of the X chromosomes in females [8]. It is not known how long it takes for a chromosome-wide dosage compensation system to evolve. To shed light on the early evolution of dosage compensation, we constructed a high-density Y-deletion map and used deletion mutants to manipulate gene dose and analyze gene expression in white campion (Silene latifolia), which evolved dioecy and sex chromosomes only 11 million years ago [9]. We demonstrate that immediate dosage compensation can be triggered by deletions in a large portion of the p arm of the Y chromosome. Our results indicate that dosage compensation in S. latifolia does not have to evolve gene by gene because a system to upregulate gene expression is already operating on part of the X chromosome, which likely represents an intermediate step in the evolution of a chromosome-wide dosage compensation system in this species.

Indexed as

Dosage Compensation, GeneticGene DeletionGenes, PlantGene ExpressionGenes, Y-LinkedSilenedosage compensationsex chromosomeSilene latifoliawhite campionY deletion

Identifiers

PMID31231053
PMCPMC6616318
OpenAlexW2952701088

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.