Evidence map›Paper›PMID 31229760›Full record

ArticleMedical image analysis2019

Suite of meshless algorithms for accurate computation of soft tissue deformation for surgical simulation.

Grand Joldes, George Bourantas, Benjamin Zwick, Habib Chowdhury, Adam Wittek, Sudip Agrawal, Konstantinos Mountris, Damon Hyde, Simon K Warfield, Karol Miller

Abstract read
In one paragraph

Article in Medical image analysis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. PersonalisedFrontiers in physiology · 2024
    Article
  5. SlicerCBM: automatic framework for biomechanical analysis of the brain.International journal of computer assisted radiology and surgery · 2023
    Article
  6. Article
  7. Article
  8. Computer simulation of tumour resection-induced brain deformation by a meshless approach.International journal for numerical methods in biomedical engineering · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Grand JoldesIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
George BourantasIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
Benjamin ZwickIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
Habib ChowdhuryIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
Adam WittekIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
Sudip AgrawalIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia.
Konstantinos MountrisAragón Institute for Engineering Research, University of Zaragoza, IIS Aragón, Spain.
Damon HydeComputational Radiology Laboratory, Boston Children's Hospital and Harvard Medical School, Boston, Massachusetts 02115, US.
Simon K WarfieldComputational Radiology Laboratory, Boston Children's Hospital and Harvard Medical School, Boston, Massachusetts 02115, US.
Karol MillerIntelligent Systems for Medicine Laboratory, The University of Western Australia, Crawley-Perth, Western Australia 6009, Australia; Institute of Mechanics and Advanced Materials, Cardiff School of Engineering, Cardiff University, Wales, UK. Electronic address: karol.miller@uwa.edu.au.

Funding

Improved Motion Robust MRI of ChildrenR01EB019483 · NIBIB · BOSTON CHILDREN'S HOSPITAL · PI WARFIELD, SIMON K · 2015 to 2024
$3.9M
MRI Biomarkers of Patients with Tuberous Sclerosis Complex and AutismR01NS079788 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI WARFIELD, SIMON K · 2013 to 2017
$3.6M
Prospective/Retrospective Motion Correction System for Motion Robust Pediatric MRR42MH086984 · NIMH · ROBIN MEDICAL, INC. · PI NEVO, EREZ, WARFIELD, SIMON K · 2012 to 2014
$1.8M
NIBIB NIH HHS R01 EB019483NIMH NIH HHS R42 MH086984NINDS NIH HHS R01 NS079788
6 · The paper itself

Abstract

The ability to predict patient-specific soft tissue deformations is key for computer-integrated surgery systems and the core enabling technology for a new era of personalized medicine. Element-Free Galerkin (EFG) methods are better suited for solving soft tissue deformation problems than the finite element method (FEM) due to their capability of handling large deformation while also eliminating the necessity of creating a complex predefined mesh. Nevertheless, meshless methods based on EFG formulation, exhibit three major limitations: (i) meshless shape functions using higher order basis cannot always be computed for arbitrarily distributed nodes (irregular node placement is crucial for facilitating automated discretization of complex geometries); (ii) imposition of the Essential Boundary Conditions (EBC) is not straightforward; and, (iii) numerical (Gauss) integration in space is not exact as meshless shape functions are not polynomial. This paper presents a suite of Meshless Total Lagrangian Explicit Dynamics (MTLED) algorithms incorporating a Modified Moving Least Squares (MMLS) method for interpolating scattered data both for visualization and for numerical computations of soft tissue deformation, a novel way of imposing EBC for explicit time integration, and an adaptive numerical integration procedure within the Meshless Total Lagrangian Explicit Dynamics algorithm. The appropriateness and effectiveness of the proposed methods is demonstrated using comparisons with the established non-linear procedures from commercial finite element software ABAQUS and experiments with very large deformations. To demonstrate the translational benefits of MTLED we also present a realistic brain-shift computation.

Indexed as

AlgorithmsComputer SimulationAnimalsBrainElastic ModulusFinite Element AnalysisImaging, Three-DimensionalModels, AnatomicModels, BiologicalModels, NeurologicalSheep, DomesticStress, MechanicalSwineViscosityMeshless Total Lagrangian Explicit DynamicsNonlinear computational mechanicsSoft tissuesSurgical simulation

Identifiers

PMID31229760
PMCPMC6661214

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.