Evidence map›Paper›PMID 31227701›Full record

ArticleNature communications2019

Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.

Valentin Mitterer, Ramtin Shayan, Sébastien Ferreira-Cerca, Guillaume Murat, Tanja Enne, Dana Rinaldi, Sarah Weigl, Hajrija Omanic, Pierre-Emmanuel Gleizes, Dieter Kressler and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 5 countries.

Valentin MittererInstitute for Molecular Biosciences, University of Graz, Humboldtstrasse 50, 8010, Graz, Austria.ORCID http://orcid.org/0000-0003-1587-1194
Ramtin ShayanLaboratoire de Biologie Moléculaire Eucaryote, Centre de Biologie Intégrative, Université de Toulouse, CNRS, UPS, 118 route de Narbonne, 31062, Toulouse Cedex, France.
Sébastien Ferreira-CercaBiochemistry III - Institute for Biochemistry, Genetics and Microbiology, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany. sebastien.ferreira-cerca@ur.de.
Guillaume MuratUnit of Biochemistry, Department of Biology, University of Fribourg, Chemin du Musée 10, 1700, Fribourg, Switzerland.
Tanja EnneInstitute for Molecular Biosciences, University of Graz, Humboldtstrasse 50, 8010, Graz, Austria.
Dana RinaldiLaboratoire de Biologie Moléculaire Eucaryote, Centre de Biologie Intégrative, Université de Toulouse, CNRS, UPS, 118 route de Narbonne, 31062, Toulouse Cedex, France.
Sarah WeiglInstitute for Molecular Biosciences, University of Graz, Humboldtstrasse 50, 8010, Graz, Austria.
Hajrija OmanicInstitute for Molecular Biosciences, University of Graz, Humboldtstrasse 50, 8010, Graz, Austria.
Pierre-Emmanuel GleizesLaboratoire de Biologie Moléculaire Eucaryote, Centre de Biologie Intégrative, Université de Toulouse, CNRS, UPS, 118 route de Narbonne, 31062, Toulouse Cedex, France.
Dieter KresslerUnit of Biochemistry, Department of Biology, University of Fribourg, Chemin du Musée 10, 1700, Fribourg, Switzerland. dieter.kressler@unifr.ch.ORCID http://orcid.org/0000-0003-4855-3563
Celia Plisson-ChastangLaboratoire de Biologie Moléculaire Eucaryote, Centre de Biologie Intégrative, Université de Toulouse, CNRS, UPS, 118 route de Narbonne, 31062, Toulouse Cedex, France. plisson@ibcg.biotoul.fr.
Brigitte PertschyInstitute for Molecular Biosciences, University of Graz, Humboldtstrasse 50, 8010, Graz, Austria. brigitte.pertschy@uni-graz.at.
University of Graz · ATCentre National de la Recherche Scientifique · FRUniversity of Fribourg · CHUniversity of Regensburg · DE

Funding

Agence Nationale de la Recherche (French National Research Agency) RIBOMANAustrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P27996-B21Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P28874-B21Austrian Science Fund FWF P 28874Deutsche Forschungsgemeinschaft (German Research Foundation) 409198929Deutsche Forschungsgemeinschaft (German Research Foundation) SFB960-AP1Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 31003A_156764Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 31003A_175547
6 · The paper itself

Abstract

Eukaryotic ribosomes are synthesized in a hierarchical process driven by a plethora of assembly factors, but how maturation events at physically distant sites on pre-ribosomes are coordinated is poorly understood. Using functional analyses and cryo-EM, we show that ribosomal protein Rps20 orchestrates communication between two multi-step maturation events across the pre-40S subunit. Our study reveals that during pre-40S maturation, formation of essential contacts between Rps20 and Rps3 permits assembly factor Ltv1 to recruit the Hrr25 kinase, thereby promoting Ltv1 phosphorylation. In parallel, a deeply buried Rps20 loop reaches to the opposite pre-40S side, where it stimulates Rio2 ATPase activity. Both cascades converge to the final maturation steps releasing Rio2 and phosphorylated Ltv1. We propose that conformational proofreading exerted via Rps20 constitutes a checkpoint permitting assembly factor release and progression of pre-40S maturation only after completion of all earlier maturation steps.

Identifiers

PMID31227701
PMCPMC6588571
OpenAlexW2953112044

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.