Evidence map›Paper›PMID 31227334›Full record

ArticleCell host & microbe2019

Pathogenic Autoreactive T and B Cells Cross-React with Mimotopes Expressed by a Common Human Gut Commensal to Trigger Autoimmunity.

William E Ruff, Carina Dehner, Woo J Kim, Odelya Pagovich, Cassyanne L Aguiar, Andrew T Yu, Alexander S Roth, Silvio Manfredo Vieira, Christina Kriegel, Olamide Adeniyi and 7 more

2 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 84 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed, 1 pooled it
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01787305 active not recruitingnot on this map

Longitudinal Study of the Fecal Microbiome in Persistently Anti-β2 Glycoprotein-I Positive Individuals and Patients With Antiphospholipid Syndrome

TypeobservationalSponsorYale UniversityRan2013 to 2026Enrolled16ConditionsAntiphospholipid Syndrome (APS)
NCT02394964 completednot on this map

The Human Microbiome in Immune-Mediated Diseases

TypeobservationalSponsorYale UniversityRan2014 to 2023Enrolled75ConditionsAutoimmuneArmsSample Collection
3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 1 synthesis or guideline pooled it, 149 citations in OpenAlex.

  1. Pooled it
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  12. B Cell Tolerance and Obstetric Antiphospholipid Syndrome.Clinical reviews in allergy & immunology · 2025
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  14. International journal of molecular sciences · 2025
    Article
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24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

William E RuffDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Carina DehnerDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Woo J KimDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Odelya PagovichDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Cassyanne L AguiarBarbara Volcker Center for Women and Rheumatic Diseases, Hospital for Special Surgery, Weill Cornell Medicine, New York, NY 10021, USA.
Andrew T YuDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Alexander S RothDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Silvio Manfredo VieiraDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Christina KriegelDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Olamide AdeniyiDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA.
Melissa J MullaDepartment of Obstetrics, Gynecology, and Reproductive Sciences, Yale School of Medicine, New Haven, CT 06510, USA.
Vikki M AbrahamsDepartment of Obstetrics, Gynecology, and Reproductive Sciences, Yale School of Medicine, New Haven, CT 06510, USA.
William W KwokBenaroya Research Institute at Virginia Mason, Seattle, WA 98101, USA.
Ruth NussinovComputational Structural Biology Section, Basic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA; Sackler Institute of Molecular Medicine, Department of Human Genetics and Molecular Medicine, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel.
Doruk ErkanBarbara Volcker Center for Women and Rheumatic Diseases, Hospital for Special Surgery, Weill Cornell Medicine, New York, NY 10021, USA.
Andrew L GoodmanMicrobial Sciences Institute, Department of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06536, USA.
Martin A KriegelDepartment of Immunobiology, Yale School of Medicine, New Haven, CT 06510, USA; Department of Medicine, Section of Rheumatology, Yale School of Medicine, New Haven, CT 06510, USA. Electronic address: martin.kriegel@yale.edu.
Yale University · USBenaroya Research InstituteCornell University · USHospital for Special Surgery · USTel Aviv University · IL

Funding

Renal Physiology and Phenotyping CoreP30DK079310 · NIDDK · YALE UNIVERSITY · PI SOMLO, STEFAN · 2008 to 2022
$16.8M
INTERDISCIPLINARY IMMUNOLOGY TRAINING PROGRAMT32AI007019 · NIAID · YALE UNIVERSITY · PI Carrie L. Lucas, David G. Schatz · 1985 to 2026
$14.4M
Protein Structure, Stability, and Amyloid FormationZIABC010440 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI NUSSINOV, RUTH · 2009 to 2025
$11.8M
Biomolecular Recognition and Binding MechanismsZIABC010441 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI NUSSINOV, RUTH · 2009 to 2025
$9.4M
TRAINING PROGRAM IN INVESTIGATIVE GASTROENTEROLOGYT32DK007017 · NIDDK · YALE UNIVERSITY · PI Fred Sanford Gorelick, Liza Konnikova · 1986 to 2026
$7.1M
Yale Rheumatic Diseases Research Core CenterP30AR053495 · NIAMS · YALE UNIVERSITY · PI CRAFT, JOSEPH EDGAR · 2007 to 2017
$7.0M
Human Gut Commensal Cross-reactivity in Antiphospholipid SyndromeR01AI118855 · NIAID · YALE UNIVERSITY · PI KRIEGEL, MARTIN A., MEFFRE, ERIC · 2015 to 2019
$2.1M
Role of Gender-associated Microbiota in Organ-specific AutoimmunityK08AI095318 · NIAID · YALE UNIVERSITY · PI KRIEGEL, MARTIN A. · 2011 to 2015
$682k
CCR NIH HHS HHSN261200800001CIntramural NIH HHS ZIA BC010441NCI NIH HHS HHSN261200800001ENIAID NIH HHS K08 AI095318NIAID NIH HHS R01 AI118855NIAID NIH HHS T32 AI007019NIAMS NIH HHS P30 AR053495NIDDK NIH HHS P30 DK079310NIDDK NIH HHS T32 DK007017
6 · The paper itself

Abstract

Given the immense antigenic load present in the microbiome, we hypothesized that microbiota mimotopes can be a persistent trigger in human autoimmunity via cross-reactivity. Using antiphospholipid syndrome (APS) as a model, we demonstrate cross-reactivity between non-orthologous mimotopes expressed by a common human gut commensal, Roseburia intestinalis (R. int), and T and B cell autoepitopes in the APS autoantigen β

Indexed as

AutoimmunityCross ReactionsAdultAgedAnimalsAntibodies, BacterialAntigens, BacterialAntiphospholipid SyndromeAutoantibodiesbeta 2-Glycoprotein IB-LymphocytesEubacterialesFemaleGastrointestinal TractHumansImmunoglobulin GAntibodies, BacterialAntigens, BacterialAutoantibodiesbeta 2-Glycoprotein IImmunoglobulin Gapolipoprotein HBacteroides thetaiotaomicroncalprotectinDNA methyltransferaseIgA-coated bacteriamicrobiotmemolecular mimicrysystemic autoimmunityTh1 cell clonesthrombosis

Identifiers

PMID31227334
PMCPMC8194364
OpenAlexW2950570125

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.