Evidence map›Paper›PMID 31226490›Full record

ArticleBiochimica et biophysica acta. Proteins and proteomics2019

Cleavage C-terminal to Asp leads to covalent crosslinking of long-lived human proteins.

Zhen Wang, Michael G Friedrich, Roger J W Truscott, Kevin L Schey

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Proteins and proteomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Ribosome Molecular Aging Shapes Translation Dynamics.bioRxiv : the preprint server for biology · 2026
    Article
  2. Methods for studying mammalian aquaporin biology.Biology methods & protocols · 2023
    Review
  3. Review
  4. Insight into the Mammalian Aquaporin Interactome.International journal of molecular sciences · 2022
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Tau Is Truncated in Five Regions of the Normal Adult Human Brain.International journal of molecular sciences · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Molecular Processes Implicated in Human Age-Related Nuclear Cataract.Investigative ophthalmology & visual science · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Zhen WangDepartment of Biochemistry and Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN, USA.
Michael G FriedrichIllawarra Health and Medical Research Institute, University of Wollongong, Wollongong, NSW 2522, Australia.
Roger J W TruscottIllawarra Health and Medical Research Institute, University of Wollongong, Wollongong, NSW 2522, Australia. Electronic address: rjwt@uow.edu.au.
Kevin L ScheyDepartment of Biochemistry and Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN, USA. Electronic address: k.schey@Vanderbilt.Edu.
Vanderbilt University · USIllawarra Health and Medical Research Institute · AUUniversity of Wollongong · AU

Funding

Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI David J. Calkins · 1989 to 2026
$19.6M
Mechanisms of Protein Aging in Normal and Cataractous LensesR01EY024258 · NEI · VANDERBILT UNIVERSITY · PI SCHEY, KEVIN L · 2014 to 2022
$2.6M
NEI NIH HHS P30 EY008126NEI NIH HHS R01 EY024258
6 · The paper itself

Abstract

With age, long-lived proteins in the human body deteriorate, which can have consequences both for aging and disease. The aging process is often associated with the formation of covalently crosslinked proteins. Currently our knowledge of the mechanism of formation of these crosslinks is limited. In this study, proteomics was used to characterize sites of covalent protein-protein crosslinking and identify a novel mechanism of protein-protein crosslinking in the adult human lens. In this mechanism, Lys residues are crosslinked to C-terminal Asp residues that are formed by non-enzymatic protein truncation. Ten different crosslinks were identified in major lens proteins such as αA-crystallin, αB-crystallin and AQP0. Crosslinking in AQP0 increased significantly with age and also increased significantly in cataract lenses compared with normal lenses. Using model peptides, a mechanism of formation of the Lys-Asp crosslink was elucidated. The mechanism involves spontaneous peptide cleavage on the C-terminal side of Asp residues which can take place in the pH range 5-7.4. Cleavage appears to involve attack by the side chain carboxyl group on the adjacent peptide bond, resulting in the formation of a C-terminal Asp anhydride. This anhydride intermediate can then either react with water to form Asp, or with a nucleophile, such as a free amine group to form a crosslink. If an ε-amino group of Lys or an N-terminal amine group attacks the anhydride, a covalent protein-protein crosslink will be formed. This bi-phasic mechanism represents the first report to link two spontaneous events: protein cleavage and crosslinking that are characteristic of long-lived proteins.

Indexed as

Models, Molecularalpha-Crystallin A Chainalpha-Crystallin B ChainAquaporinsAspartic AcidEye ProteinsHumansHydrogen-Ion ConcentrationLens, CrystallinePeptidesalpha-Crystallin A Chainalpha-Crystallin B Chainaquaporin 0AquaporinsAspartic AcidEye ProteinsPeptidesAgingCataractLensLong-lived proteinsRacemisation

Identifiers

PMID31226490
PMCPMC9227964
OpenAlexW2949105714

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.