Evidence map›Paper›PMID 31226372›Full record

ArticleInternational journal of biological macromolecules2019

A beetle antifreeze protein protects lactate dehydrogenase under freeze-thawing.

Celeste Rodriguez, Seyed Sajjadi, Ravinder Abrol, Xin Wen

Open access · greenAbstract read
In one paragraph

Article in International journal of biological macromolecules, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Celeste RodriguezDepartment of Chemistry and Biochemistry, California State University Los Angeles, Los Angeles, CA 90032, USA.
Seyed SajjadiDepartment of Chemistry and Biochemistry, California State University Northridge, CA 91330, USA.
Ravinder AbrolDepartment of Chemistry and Biochemistry, California State University Northridge, CA 91330, USA. Electronic address: abrol@csun.edu.
Xin WenDepartment of Chemistry and Biochemistry, California State University Los Angeles, Los Angeles, CA 90032, USA. Electronic address: xwen3@calstatela.edu.
California State University Los Angeles · USCalifornia State University, Northridge · US

Funding

IDENTIFICATION AND MOLECULAR BASIS FOR EFFICIENT ANTIFREEZE PROTIEN ENHANCERSSC3GM086249 · NIGMS · CALIFORNIA STATE UNIVERSITY LOS ANGELES · PI WEN, XIN · 2009 to 2023
$1.7M
NIGMS NIH HHS SC3 GM086249
6 · The paper itself

Abstract

Effects of a beetle antifreeze proteins (AFP) from Dendroides canadensis (DAFP-1) on a model freeze-labile enzyme, lactate dehydrogenase (LDH), were investigated under freezing and thawing conditions. The presence of DAFP-1 can effectively protect the enzymatic activity of LDH upon repeated freezing and thawing and the protective role of DAFP-1 is more significant than that of bovine serum albumin (BSA), a common protectant for freeze-labile proteins. The results of circular dichroism (CD) spectroscopy suggest that the presence of DAFP-1 provides protection to the denaturation of LDH under freezing and thawing. The molecular dynamics (MD) simulation of DAFP-1 and LDH suggests that DAFP-1 interacts with LDH using its ice-binding surface (IBS) and mainly through its arginine residues. A mutant of DAFP-1, where all the arginine residues were replaced by alanine residues, lost its effect in protecting LDH under freezing and thawing. The results demonstrated that DAFP-1 is an effective protectant for a freeze-labile protein under freezing and thawing and the arginine residues in DAFP-1 are important for its protective role. By correlating the protective effect of an AFP with its structure, new insights in the identification and development of effective protectants for freeze-labile proteins were provided.

Indexed as

ColeopteraFreezingAnimalsAntifreeze ProteinsInsect ProteinsL-Lactate DehydrogenaseMolecular Dynamics SimulationProtein ConformationProtein DenaturationAntifreeze ProteinsInsect ProteinsL-Lactate DehydrogenaseAntifreeze proteinFreeze denaturationFreeze-labile protein stabilizationFreeze-thawing

Identifiers

PMID31226372
PMCPMC9188845
OpenAlexW2951988850

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.