Evidence map›Paper›PMID 31226167›Full record

ArticlePLoS pathogens2019

Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.

Roberto Gozalbo-Rovira, J Rafael Ciges-Tomas, Susana Vila-Vicent, Javier Buesa, Cristina Santiso-Bellón, Vicente Monedero, María J Yebra, Alberto Marina, Jesús Rodríguez-Díaz

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 60 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Roberto Gozalbo-RoviraDepartament of Microbiology, Faculty of Medicine, University of Valencia, Valencia, Spain.ORCID 0000-0003-3427-3800
J Rafael Ciges-TomasDepartment of Genomic and Proteomic, Instituto de Biomedicina de Valencia (IBV-CSIC) and CIBER de Enfermedades Raras (CIBERER), Valencia, Spain.ORCID 0000-0003-2647-3052
Susana Vila-VicentDepartament of Microbiology, Faculty of Medicine, University of Valencia, Valencia, Spain.
Javier BuesaDepartament of Microbiology, Faculty of Medicine, University of Valencia, Valencia, Spain.ORCID 0000-0002-3328-3428
Cristina Santiso-BellónDepartament of Microbiology, Faculty of Medicine, University of Valencia, Valencia, Spain.
Vicente MonederoDepartment of Food Biotechnology, Institute of Agrochemistry and Food Technology (IATA-CSIC), Paterna, Spain.
María J YebraDepartment of Food Biotechnology, Institute of Agrochemistry and Food Technology (IATA-CSIC), Paterna, Spain.
Alberto MarinaDepartment of Genomic and Proteomic, Instituto de Biomedicina de Valencia (IBV-CSIC) and CIBER de Enfermedades Raras (CIBERER), Valencia, Spain.
Jesús Rodríguez-DíazDepartament of Microbiology, Faculty of Medicine, University of Valencia, Valencia, Spain.ORCID 0000-0002-9698-7684
Universitat de València · ESCentre for Biomedical Network Research on Rare Diseases · ESInstituto de Agroquímica y Tecnología de Alimentos · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rotavirus is the leading agent causing acute gastroenteritis in young children, with the P[8] genotype accounting for more than 80% of infections in humans. The molecular bases for binding of the VP8* domain from P[8] VP4 spike protein to its cellular receptor, the secretory H type-1 antigen (Fuc-α1,2-Gal-β1,3-GlcNAc; H1), and to its precursor lacto-N-biose (Gal-β1,3-GlcNAc; LNB) have been determined. The resolution of P[8] VP8* crystal structures in complex with H1 antigen and LNB and site-directed mutagenesis experiments revealed that both glycans bind to the P[8] VP8* protein through a binding pocket shared with other members of the P[II] genogroup (i.e.: P[4], P[6] and P[19]). Our results show that the L-fucose moiety from H1 only displays indirect contacts with P[8] VP8*. However, the induced conformational changes in the LNB moiety increase the ligand affinity by two-fold, as measured by surface plasmon resonance (SPR), providing a molecular explanation for the different susceptibility to rotavirus infection between secretor and non-secretor individuals. The unexpected interaction of P[8] VP8* with LNB, a building block of type-1 human milk oligosaccharides, resulted in inhibition of rotavirus infection, highlighting the role and possible application of this disaccharide as an antiviral. While key amino acids in the H1/LNB binding pocket were highly conserved in members of the P[II] genogroup, differences were found in ligand affinities among distinct P[8] genetic lineages. The variation in affinities were explained by subtle structural differences induced by amino acid changes in the vicinity of the binding pocket, providing a fine-tuning mechanism for glycan binding in P[8] rotavirus.

Indexed as

ABO Blood-Group SystemAntigens, ViralBinding SitesCapsid ProteinsCell LineCrystallography, X-RayHumansRNA-Binding ProteinsRotavirusViral Nonstructural ProteinsABO Blood-Group SystemAntigens, ViralCapsid ProteinsH1 blood group antigenNS35 protein, rotavirusRNA-Binding ProteinsViral Nonstructural ProteinsVP4 protein, Rotavirus

Identifiers

PMID31226167
PMCPMC6609034
OpenAlexW2953034363

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.