Evidence map›Paper›PMID 31225439›Full record

ArticleCell stress2017

The role of hydrophobic matching on transmembrane helix packing in cells.

Brayan Grau, Matti Javanainen, Maria Jesús García-Murria, Waldemar Kulig, Ilpo Vattulainen, Ismael Mingarro, Luis Martínez-Gil

Abstract read
In one paragraph

Article in Cell stress, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Energetics of the Transmembrane Peptide Sorting by Hydrophobic Mismatch.The journal of physical chemistry letters · 2024
    Article
  6. Review
  7. Review
  8. Article
  9. Computational design of BclxL inhibitors that target transmembrane domain interactions.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Folding and Insertion of Transmembrane Helices at the ER.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Mcl-1 and Bok transmembrane domains: Unexpected players in the modulation of apoptosis.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Brayan GrauDepartamento de Bioquímica y Biología Molecular, ERI BioTecMed, Universitat de València, E-46100 Burjassot, Spain.
Matti JavanainenLaboratory of Physics, Tampere University of Technology, FI-33101 Tampere, Finland.
Maria Jesús García-MurriaDepartamento de Bioquímica y Biología Molecular, ERI BioTecMed, Universitat de València, E-46100 Burjassot, Spain.
Waldemar KuligLaboratory of Physics, Tampere University of Technology, FI-33101 Tampere, Finland.
Ilpo VattulainenLaboratory of Physics, Tampere University of Technology, FI-33101 Tampere, Finland.
Ismael MingarroDepartamento de Bioquímica y Biología Molecular, ERI BioTecMed, Universitat de València, E-46100 Burjassot, Spain.
Luis Martínez-GilDepartamento de Bioquímica y Biología Molecular, ERI BioTecMed, Universitat de València, E-46100 Burjassot, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Folding and packing of membrane proteins are highly influenced by the lipidic component of the membrane. Here, we explore how the hydrophobic mismatch (the difference between the hydrophobic span of a transmembrane protein region and the hydrophobic thickness of the lipid membrane around the protein) influences transmembrane helix packing in a cellular environment. Using a ToxRED assay in

Indexed as

Glycophorin Ahelix packinghydrophobic matchmembrane protein foldingmismatchtransmembrane domain dimerization

Identifiers

PMID31225439
PMCPMC6551820

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.