Evidence map›Paper›PMID 31223657›Full record

ArticleScience advances2019

Structure of the saxiphilin:saxitoxin (STX) complex reveals a convergent molecular recognition strategy for paralytic toxins.

Tien-Jui Yen, Marco Lolicato, Rhiannon Thomas-Tran, J Du Bois, Daniel L Minor

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Saxiphilin is a broad-spectrum toxin sponge for C13-modified saxitoxins.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Definition of a saxitoxin (STX) binding code enables discovery and characterization of the anuran saxiphilin family.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Convergent evolution of toxin resistance in animals.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  14. Article
  15. Article
  16. Review
  17. Rapid toxin sequestration modifies poison frog physiology.The Journal of experimental biology · 2021
    Article
  18. Mechanisms Applied by Protein Inhibitors to Inhibit Cysteine Proteases.International journal of molecular sciences · 2021
    Review
  19. Host-Parasite Interaction of Atlantic salmon (Frontiers in immunology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Tien-Jui YenCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0002-3311-0201
Marco LolicatoCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0002-2022-7961
Rhiannon Thomas-TranDepartment of Chemistry, Stanford University, Stanford, CA 94305, USA.
J Du BoisDepartment of Chemistry, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0001-7847-1548
Daniel L MinorCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0002-5998-4214
Stanford University · USUniversity of California, San Francisco · USQB3 · US

Funding

Structure and function of voltage-gated calcium channelsR01HL080050 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DANIEL L MINOR · 2005 to 2026
$9.8M
Guanidinium Toxins as Molecular Probes for NaV StudyR01GM117263 · NIGMS · STANFORD UNIVERSITY · PI DU BOIS, JUSTIN · 2016 to 2024
$3.5M
NHLBI NIH HHS R01 HL080050NIGMS NIH HHS R01 GM117263
6 · The paper itself

Abstract

Dinoflagelates and cyanobacteria produce saxitoxin (STX), a lethal bis-guanidinium neurotoxin causing paralytic shellfish poisoning. A number of metazoans have soluble STX-binding proteins that may prevent STX intoxication. However, their STX molecular recognition mechanisms remain unknown. Here, we present structures of saxiphilin (Sxph), a bullfrog high-affinity STX-binding protein, alone and bound to STX. The structures reveal a novel high-affinity STX-binding site built from a "proto-pocket" on a transferrin scaffold that also bears thyroglobulin domain protease inhibitor repeats. Comparison of Sxph and voltage-gated sodium channel STX-binding sites reveals a convergent toxin recognition strategy comprising a largely rigid binding site where acidic side chains and a cation-π interaction engage STX. These studies reveal molecular rules for STX recognition, outline how a toxin-binding site can be built on a naïve scaffold, and open a path to developing protein sensors for environmental STX monitoring and new biologics for STX intoxication mitigation.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCarrier ProteinsCell LineCyanobacteriaHumansPeptide HydrolasesProtease InhibitorsProtein BindingRana catesbeianaSaxitoxinSf9 CellsSodium ChannelsThyroglobulinTransferrinCarrier ProteinsPeptide HydrolasesProtease InhibitorsSaxitoxinSodium ChannelsThyroglobulinTransferrin

Identifiers

PMID31223657
PMCPMC6584486
OpenAlexW2952552192

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.