Evidence map›Paper›PMID 31223656›Full record

ArticleScience advances2019

Archaea dominate oxic subseafloor communities over multimillion-year time scales.

Aurèle Vuillemin, Scott D Wankel, Ömer K Coskun, Tobias Magritsch, Sergio Vargas, Emily R Estes, Arthur J Spivack, David C Smith, Robert Pockalny, Richard W Murray and 2 more

Abstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Aurèle VuilleminDepartment of Earth and Environmental Sciences, Paleontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany.ORCID 0000-0002-7724-8931
Scott D WankelDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA.ORCID 0000-0002-7683-0225
Ömer K CoskunDepartment of Earth and Environmental Sciences, Paleontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany.
Tobias MagritschDepartment of Earth and Environmental Sciences, Paleontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany.ORCID 0000-0002-9454-0563
Sergio VargasDepartment of Earth and Environmental Sciences, Paleontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany.ORCID 0000-0001-8704-1339
Emily R EstesCollege of Earth, Ocean, and Environment, University of Delaware, Lewes, DE 19958, USA.ORCID 0000-0002-2293-3827
Arthur J SpivackGraduate School of Oceanography, University of Rhode Island, Narragansett, RI 02882, USA.
David C SmithGraduate School of Oceanography, University of Rhode Island, Narragansett, RI 02882, USA.ORCID 0000-0003-0627-5788
Robert PockalnyGraduate School of Oceanography, University of Rhode Island, Narragansett, RI 02882, USA.
Richard W MurrayDepartment of Earth and Environment, Boston University, Boston, MA 02215, USA.ORCID 0000-0002-7688-4098
Steven D'HondtGraduate School of Oceanography, University of Rhode Island, Narragansett, RI 02882, USA.
William D OrsiDepartment of Earth and Environmental Sciences, Paleontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany.ORCID 0000-0002-4094-5637

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ammonia-oxidizing archaea (AOA) dominate microbial communities throughout oxic subseafloor sediment deposited over millions of years in the North Atlantic Ocean. Rates of nitrification correlated with the abundance of these dominant AOA populations, whose metabolism is characterized by ammonia oxidation, mixotrophic utilization of organic nitrogen, deamination, and the energetically efficient chemolithoautotrophic hydroxypropionate/hydroxybutyrate carbon fixation cycle. These AOA thus have the potential to couple mixotrophic and chemolithoautotrophic metabolism via mixotrophic deamination of organic nitrogen, followed by oxidation of the regenerated ammonia for additional energy to fuel carbon fixation. This metabolic feature likely reduces energy loss and improves AOA fitness under energy-starved, oxic conditions, thereby allowing them to outcompete other taxa for millions of years.

Indexed as

AmmoniaArchaeaCarbon CycleGeologic SedimentsMicrobiotaNitrogenNitrogen CycleOxidation-ReductionWater MicrobiologyAmmoniaNitrogen

Identifiers

PMID31223656
PMCPMC6584578

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.