Evidence map›Paper›PMID 31222145›Full record

ArticleScientific reports2019

Localization of RalB signaling at endomembrane compartments and its modulation by autophagy.

Manish Kumar Singh, Alexandre P J Martin, Carine Joffre, Giulia Zago, Jacques Camonis, Mathieu Coppey, Maria Carla Parrini

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Manish Kumar SinghInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
Alexandre P J MartinInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
Carine JoffreCentre de Recherches en Cancérologie de Toulouse (CRCT), Inserm UMR1037, Toulouse, France.ORCID http://orcid.org/0000-0002-7551-356X
Giulia ZagoInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
Jacques CamonisInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
Mathieu CoppeyInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
Maria Carla ParriniInstitut Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France. maria-carla.parrini@curie.fr.
Inserm · FRLehmann Eye Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The monomeric GTPase RalB controls crucial physiological processes, including autophagy and invasion, but it still remains unclear how this multi-functionality is achieved. Previously, we reported that the RalGEF (Guanine nucleotide Exchange Factor) RGL2 binds and activates RalB to promote invasion. Here we show that RGL2, a major activator of RalB, is also required for autophagy. Using a novel automated image analysis method, Endomapper, we quantified the endogenous localization of the RGL2 activator and its substrate RalB at different endomembrane compartments, in an isogenic normal and Ras-transformed cell model. In both normal and Ras-transformed cells, we observed that RGL2 and RalB substantially localize at early and recycling endosomes, and to lesser extent at autophagosomes, but not at trans-Golgi. Interestingly the use of a FRET-based RalB biosensor indicated that RalB signaling is active at these endomembrane compartments at basal level in rich medium. Furthermore, induction of autophagy by nutrient starvation led to a considerable reduction of early and recycling endosomes, in contrast to the expected increase of autophagosomes, in both normal and Ras-transformed cells. However, autophagy mildly affected relative abundances of both RGL2 and RalB at early and recycling endosomes, and at autophagosomes. Interestingly, RalB activity increased at autophagosomes upon starvation in normal cells. These results suggest that the contribution of endosome membranes (carrying RGL2 and RalB molecules) increases total pool of RGL2-RalB at autophagosome forming compartments and might contribute to amplify RalB signaling to support autophagy.

Indexed as

Signal TransductionAutophagyCell CompartmentationGuanine Nucleotide Exchange FactorsHumansIntracellular MembranesProtein Transportral GTP-Binding ProteinsGuanine Nucleotide Exchange FactorsRalb protein, humanral GTP-Binding ProteinsRGL2 protein, human

Identifiers

PMID31222145
PMCPMC6586930
OpenAlexW2951954815

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.