Evidence map›Paper›PMID 31221220›Full record

ArticleEpigenetics & chromatin2019

PRDM14 controls X-chromosomal and global epigenetic reprogramming of H3K27me3 in migrating mouse primordial germ cells.

Anna Mallol, Maria Guirola, Bernhard Payer

Open access · goldAbstract read
In one paragraph

Article in Epigenetics & chromatin, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Cohesin controls X chromosome structure remodeling and X-reactivation during mouse iPSC-reprogramming.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Germline stem cells in human.Signal transduction and targeted therapy · 2022
    Review
  8. Early Gonadal Development and Sex Determination in Mammal.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Histone 3 Lysine 27 Trimethylation Signature in Breast Cancer.International journal of molecular sciences · 2021
    Review
  13. Global DNA 5hmC and CK19Current oncology (Toronto, Ont.) · 2021
    Article
  14. Article
  15. To Be or Not to Be a Germ Cell: The Extragonadal Germ Cell Tumor Paradigm.International journal of molecular sciences · 2021
    Review
  16. Review
  17. Sperm Functional Genome Associated With Bull Fertility.Frontiers in veterinary science · 2021
    Review
  18. Review
  19. X Inactivation and Escape: Epigenetic and Structural Features.Frontiers in cell and developmental biology · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Anna MallolCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003, Barcelona, Spain.ORCID 0000-0001-7366-0980
Maria GuirolaCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003, Barcelona, Spain.ORCID 0000-0003-1381-4567
Bernhard PayerCentre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003, Barcelona, Spain. bernhard.payer@crg.eu.ORCID 0000-0002-4694-2082
Centre for Genomic Regulation · ESUniversitat Pompeu Fabra · ES

Funding

Agència de Gestió d'Ajuts Universitaris i de Recerca 2017 SGR 346Ministerio de Economía, Industria y Competitividad, Gobierno de España BFU2014-55275-PMinisterio de Economía, Industria y Competitividad, Gobierno de España BFU2017-88407-P
6 · The paper itself

Abstract

backgroundIn order to prepare the genome for gametogenesis, primordial germ cells (PGCs) undergo extensive epigenetic reprogramming during migration toward the gonads in mammalian embryos. This includes changes on a genome-wide scale and additionally in females the remodeling of the inactive X-chromosome to enable X-chromosome reactivation (XCR). However, if global remodeling and X-chromosomal remodeling are related, how they occur in PGCs in vivo in relation to their migration progress and which factors are important are unknown.

resultsHere we identify the germ cell determinant PR-domain containing protein 14 (PRDM14) as the first known factor that is instrumental for both global reprogramming and X-chromosomal reprogramming in migrating mouse PGCs. We find that global upregulation of the repressive histone H3 lysine 27 trimethylation (H3K27me3) mark is PRDM14 dosage dependent in PGCs of both sexes. When focusing on XCR, we observed that PRDM14 is required for removal of H3K27me3 from the inactive X-chromosome, which, in contrast to global upregulation, takes place progressively along the PGC migration path. Furthermore, we show that global and X-chromosomal reprogramming of H3K27me3 are functionally separable, despite their common regulation by PRDM14.

conclusionsIn summary, here we provide new insight and spatiotemporal resolution to the progression and regulation of epigenome remodeling along mouse PGC migration in vivo and link epigenetic reprogramming to its developmental context.

Indexed as

AnimalsCell MovementCellular ReprogrammingDNA-Binding ProteinsDNA MethylationEmbryonic Germ CellsEpigenesis, GeneticFemaleHistonesMaleMiceMice, Inbred C57BLRepressor ProteinsRNA-Binding ProteinsTranscriptional ActivationTranscription FactorsDNA-Binding ProteinsHistonesPrdm14 protein, mouseRepressor ProteinsRNA-Binding ProteinsTranscription FactorsEpigenetic reprogrammingH3K27me3MousePGCsPRDM14X-chromosome reactivation

Identifiers

PMID31221220
PMCPMC6585054
OpenAlexW2949190642

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.