Evidence map›Paper›PMID 31220976›Full record

ReviewAnnual review of biochemistry2019

Redox Chemistry in the Genome: Emergence of the [4Fe4S] Cofactor in Repair and Replication.

Jacqueline K Barton, Rebekah M B Silva, Elizabeth O'Brien

Open access · greenAbstract readReview
In one paragraph

Review in Annual review of biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 78 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. 8-Oxoguanine: A Lesion, an Epigenetic Mark, or a Molecular Signal?International journal of molecular sciences · 2025
    Review
  5. The function of Mak16 in ribosome biogenesis depends on its [4Fe-4S] cluster.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Proteomic strategies to interrogate the Fe-S proteome.Biochimica et biophysica acta. Molecular cell research · 2024
    Review
  13. WhiB-like proteins: Diversity of structure, function and mechanism.Biochimica et biophysica acta. Molecular cell research · 2024
    Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. An iron-sulfur cluster in the zinc-binding domain of the SARS-CoV-2 helicase modulates its RNA-binding and -unwinding activities.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jacqueline K BartonDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA; email: jkbarton@caltech.edu.
Rebekah M B SilvaDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA; email: jkbarton@caltech.edu.
Elizabeth O'BrienDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA; email: jkbarton@caltech.edu.
California Institute of Technology · US

Funding

DNA Sensing and SignalingR35GM126904 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BARTON, JACQUELINE K · 2018 to 2021
$2.4M
NIGMS NIH HHS R35 GM126904
6 · The paper itself

Abstract

Many DNA-processing enzymes have been shown to contain a [4Fe4S] cluster, a common redox cofactor in biology. Using DNA electrochemistry, we find that binding of the DNA polyanion promotes a negative shift in [4Fe4S] cluster potential, which corresponds thermodynamically to a ∼500-fold increase in DNA-binding affinity for the oxidized [4Fe4S]

Indexed as

GenomeAnimalsBacteriaDNADNA DamageDNA-Directed DNA PolymeraseDNA GlycosylasesDNA HelicasesDNA RepairDNA ReplicationElectron Spin Resonance SpectroscopyEndonucleasesIron-Sulfur ProteinsOxidation-ReductionProtein BindingSignal TransductionDNADNA-Directed DNA PolymeraseDNA GlycosylasesDNA HelicasesEndonucleasesIron-Sulfur Proteinsbase excision repairDNA charge transportDNA polymeraseDNA primaseiron–sulfur clustersoxidative stressredox signaling

Identifiers

PMID31220976
PMCPMC6590699
OpenAlexW2950929424

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.