Evidence map›Paper›PMID 31219225›Full record

SynthesisObesity (Silver Spring, Md.)2019

Genome-Wide Association Study Identifies Loci for Liver Enzyme Concentrations in Mexican Americans: The GUARDIAN Consortium.

Kendra A Young, Nicholette D Palmer, Tasha E Fingerlin, Carl D Langefeld, Jill M Norris, Nan Wang, Anny H Xiang, Xiuqing Guo, Adrienne H Williams, Yii-Der I Chen and 6 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Obesity (Silver Spring, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Steatotic liver disease in Latin America: current views and perspectives.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  2. Linked Intronic Polymorphisms of theInternational journal of molecular sciences · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Kendra A YoungDepartment of Epidemiology, Colorado School of Public Health, University of Colorado Denver, Aurora, Colorado, USA.ORCID 0000-0002-8664-7635
Nicholette D PalmerDepartment of Biochemistry, School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.
Tasha E FingerlinDepartment of Epidemiology, Colorado School of Public Health, University of Colorado Denver, Aurora, Colorado, USA.
Carl D LangefeldDepartment of Biostatistical Sciences, School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.
Jill M NorrisDepartment of Epidemiology, Colorado School of Public Health, University of Colorado Denver, Aurora, Colorado, USA.
Nan WangDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Anny H XiangResearch and Evaluation Branch, Kaiser Permanente of Southern California, Pasadena, California, USA.ORCID 0000-0003-2786-1268
Xiuqing GuoInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, California, USA.
Adrienne H WilliamsDepartment of Biostatistical Sciences, School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.
Yii-Der I ChenInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, California, USA.
Kent D TaylorInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, California, USA.
Jerome I RotterInstitute for Translational Genomics and Population Sciences, Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, California, USA.
Leslie J RaffelMedical Genetics Research Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Mark O GoodarziMedical Genetics Research Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Richard M WatanabeDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Lynne E WagenknechtDivision of Public Health Sciences, School of Medicine, Wake Forest University, Winston-Salem, North Carolina, USA.
The Lundquist Institute · USWake Forest University · USColorado School of Public Health · USCedars-Sinai Medical Center · USUniversity of Southern California · USKaiser Permanente · US

Funding

ROLE OF LIPOXYGENASES IN ATHEROGENESIS IN DIABETES MELLITUSP01HL055798 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI TAYLOR, ANGELA M · 1995 to 2016
$28.4M
Genetics of Beta Cell Failure in Mexican AmericansR01DK061628 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BUCHANAN, THOMAS A, XIANG, ANNY H · 2003 to 2012
$10.0M
Genetic & Epidemiologic Predictors of Glucose Homeostasis Measures in HispanicsR01DK085175 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WAGENKNECHT, LYNNE E, WATANABE, RICHARD M · 2010 to 2013
$6.9M
IRAS FAMILY STUDY--GENETICS OF INSULIN RESISTANCER01HL060944 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WAGENKNECHT, LYNNE E · 1999 to 2009
$5.5M
Mapping Genes for Atherosclerosis and Insulin ResistanceR01HL088457 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI ROTTER, JEROME I · 2007 to 2010
$3.0M
Mapping the Genes for Hypertension &Insulin ResistanceR01HL067974 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI ROTTER, JEROME I · 2002 to 2006
$2.9M
IRAS FAMILY STUDY--GENETICS OF INSULIN RESISTANCER01HL061019 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI NORRIS, JILL M · 1999 to 2009
$2.6M
G PROTEIN FUNCTION IN HEMATOPOIESIS AND EMBRYOGENESISR01DK047890 · NIDDK · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI WILKIE, THOMAS M · 1995 to 1998
–
INSULIN RESISTANCE AND CARDIOVASCULAR DISEASEU01HL047892 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J. · 1991 to 1999
–
INSULIN RESISTANCE AND ATHEROSCLEROSIS STUDY (IRAS)U01HL047902 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SAAD, MOHAMMED F · 1991 to 1999
–
NHLBI NIH HHS P01 HL055798NHLBI NIH HHS R01 HL060944NHLBI NIH HHS R01 HL061019NHLBI NIH HHS R01 HL067974NHLBI NIH HHS R01 HL088457NHLBI NIH HHS U01 HL047892NHLBI NIH HHS U01 HL047902NIDDK NIH HHS HL-047887NIDDK NIH HHS HL-047889NIDDK NIH HHS HL-047890NIDDK NIH HHS R01 DK061628NIDDK NIH HHS R01 DK085175
6 · The paper itself

Abstract

objectivePopulations of Mexican American ancestry are at an increased risk for nonalcoholic fatty liver disease. The objective of this study was to determine whether loci in known and novel genes were associated with variation in aspartate aminotransferase (AST) (n = 3,644), alanine aminotransferase (ALT) (n = 3,595), and gamma-glutamyl transferase (GGT) (n = 1,577) levels by conducting the first genome-wide association study (GWAS) of liver enzymes, which commonly measure liver function, in individuals of Mexican American ancestry.

methodsLevels of AST, ALT, and GGT were determined by enzymatic colorimetric assays. A multi-cohort GWAS of individuals of Mexican American ancestry was performed. Single-nucleotide polymorphisms (SNP) were tested for association with liver outcomes by multivariable linear regression using an additive genetic model. Association analyses were conducted separately in each cohort, followed by a nonparametric meta-analysis.

resultsIn the PNPLA3 gene, rs4823173 (P = 3.44 × 10

conclusionsPNPLA3, a locus previously identified with ALT, AST, and nonalcoholic fatty liver disease in European and Japanese GWAS, is also associated with liver enzymes in populations of Mexican American ancestry.

Indexed as

AcyltransferasesAdultAlanine TransaminaseAspartate AminotransferasesFemalegamma-GlutamyltransferaseGenetic LociGenome-Wide Association StudyHumansLinear ModelsLipaseLiverMaleMembrane ProteinsMexican AmericansMiddle AgedAcyltransferasesAlanine TransaminaseAspartate Aminotransferasesgamma-GlutamyltransferaseLipaseMembrane ProteinsPhospholipases A2, Calcium-IndependentPNPLA3 protein, human

Identifiers

PMID31219225
PMCPMC6656610
OpenAlexW2949347592

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.