Evidence map›Paper›PMID 31218921›Full record

ArticleStem cells and development2019

Histone Methylation Mechanisms Modulate the Inflammatory Response of Periodontal Ligament Progenitors.

Marybeth Francis, Mirali Pandya, Gokul Gopinathan, Huling Lyu, Wei Ma, Deborah Foyle, Salvadore Nares, Xianghong Luan

Open access · greenAbstract read
In one paragraph

Article in Stem cells and development, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. MAT2A inhibition suppresses inflammation inJournal of oral microbiology · 2024
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. TRIM14 inhibits OPTN-mediated autophagic degradation of KDM4D to epigenetically regulate inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Experimental and therapeutic medicine · 2022
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Marybeth Francis1Department of Periodontics, Center for Craniofacial Research and Diagnosis, Texas A&M College of Dentistry, Dallas, Texas.
Mirali Pandya1Department of Periodontics, Center for Craniofacial Research and Diagnosis, Texas A&M College of Dentistry, Dallas, Texas.
Gokul Gopinathan1Department of Periodontics, Center for Craniofacial Research and Diagnosis, Texas A&M College of Dentistry, Dallas, Texas.
Huling Lyu3Key Laboratory of Oral Medicine, Guangzhou Institute of Oral Disease, Stomatological Hospital of Guangzhou Medical University, Guangzhou, China.
Wei Ma4Department of Stomatology, The Fourth Affiliated Hospital, Harbin Medical University, Harbin, China.
Deborah Foyle1Department of Periodontics, Center for Craniofacial Research and Diagnosis, Texas A&M College of Dentistry, Dallas, Texas.
Salvadore Nares5Department of Periodontics, UIC College of Dentistry, Chicago, Illinois.
Xianghong Luan1Department of Periodontics, Center for Craniofacial Research and Diagnosis, Texas A&M College of Dentistry, Dallas, Texas.
Fourth Affiliated Hospital of Harbin Medical University · CNGuangzhou Medical University · CNUniversity of Illinois Chicago · US

Funding

Small Molecule Microenvironment Design for Craniofacial Bone Regeneration and EngineeringR01DE019463 · NIDCR · UNIVERSITY OF ROCHESTER · PI LUAN, XIANGHONG · 2009 to 2021
$2.8M
NIDCR Individual Predoctoral Scientist FellowshipF30DE024352 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI FRANCIS, MARYBETH · 2014 to 2018
$247k
NIDCR NIH HHS F30 DE024352NIDCR NIH HHS R01 DE019463
6 · The paper itself

Abstract

Inflammatory conditions affect periodontal ligament (PDL) homeostasis and diminish its regenerative capacity. The complexity of biological activities during an inflammatory response depends on genetic and epigenetic mechanisms. To characterize the epigenetic changes in response to periodontal pathogens we have focused on histone lysine methylation as a relatively stable chromatin modification involved in the epigenetic activation and repression of transcription and a prime candidate mechanism responsible for the exacerbated and prolonged response of periodontal cells and tissues to dental plaque biofilm. To determine the effect of inflammatory conditions on histone methylation profiles, related gene expression and cellular functions of human periodontal ligament (hPDL) progenitor cells, a hPDL cell culture system was subjected to bacterial cell wall toxin exposure [lipopolysaccharide (LPS)]. Chromatin immunoprecipitation-on-chip analysis revealed that healthy PDL cells featured high enrichment levels for the active H3K4me3 mark at

Indexed as

Cell DifferentiationCells, CulturedDNA MethylationEpigenesis, GeneticGene Expression RegulationHistone MethyltransferasesHistonesHumansInflammationLipopolysaccharidesOsteogenesisPeriodontal LigamentPeriodontitisProtein Processing, Post-TranslationalStem Cellshistone H3 trimethyl Lys4Histone MethyltransferasesHistonesLipopolysaccharidesepigenetic regulationextracellular matrix genesinflammationperiodontal ligament

Identifiers

PMID31218921
PMCPMC6661920
OpenAlexW2951974559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.