Evidence map›Paper›PMID 31217828›Full record

ArticleStatistics in biosciences2019

Brain connectivity-informed regularization methods for regression.

Marta Karas, Damian Brzyski, Mario Dzemidzic, Joaquín Goñi, David A Kareken, Timothy W Randolph, Jaroslaw Harezlak

Open access · greenAbstract read
In one paragraph

Article in Statistics in biosciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact, top 75% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 0 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. TOPOLOGICAL LEARNING FOR BRAIN NETWORKS.The annals of applied statistics · 2023
    Article
  5. Article
  6. Connectivity-informed adaptive regularization for generalized outcomes.The Canadian journal of statistics = Revue canadienne de statistique · 2021
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Marta Karas615 N. Wolfe Street, Suite E3039, Baltimore, MD 21205, Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health.
Damian Brzyski1025 E. 7th Street, Suite E112, Bloomington, IN 47405, Department of Epidemiology and Biostatistics, Indiana University Bloomington.
Mario Dzemidzic355 W. 16th Street, Suite 4600, Indianapolis, IN 46202, Department of Neurology, Indiana University School of Medicine.
Joaquín Goñi315 N. Grant Street, West Lafayette, IN 47907-2023, School of Industrial Engineering and Weldon School of Biomedical Engineering, Purdue University.
David A Kareken355 W. 16th Street, Suite 4348, Indianapolis, IN 46202,, Department of Neurology, Indiana University School of Medicine.
Timothy W Randolph1100 Fairview Ave. N, M2-B500, Seattle, WA 98109, Biostatistics and Biomathematics, Public Health Sciences Division, Fred Hutchinson Cancer Research Center.
Jaroslaw Harezlak1025 E. 7th Street, Suite C107, Bloomington, IN 47405, Department of Epidemiology and Biostatistics, Indiana University Bloomington.
Indiana University Bloomington · USIndiana University – Purdue University Indianapolis · USFred Hutch Cancer Center · USJohns Hopkins University · USPurdue University West Lafayette · US

Funding

Translational Research and Science Education (OUT)P60AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Marian Lee Logrip · 2003 to 2026
$45.5M
RAT RESEARCH COMPONENTP50AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI LUMENG, LAWRENCE · 1987 to 2002
$5.3M
Brain reward responses to sweet tastes in alcoholism riskR01AA022476 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI KAREKEN, DAVID A. · 2014 to 2018
$2.8M
Dopaminergic Function in AlcoholismR01AA017661 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI KAREKEN, DAVID A. · 2009 to 2013
$2.8M
Statistical models for multi-modal brain imaging studies of HIV-associated cognitive declineR01MH108467 · NIMH · INDIANA UNIVERSITY INDIANAPOLIS · PI HAREZLAK, JAROSLAW · 2015 to 2019
$2.0M
NIAAA NIH HHS P50 AA007611NIAAA NIH HHS P60 AA007611NIAAA NIH HHS R01 AA017661NIAAA NIH HHS R01 AA022476NIMH NIH HHS R01 MH108467
6 · The paper itself

Abstract

One of the challenging problems in brain imaging research is a principled incorporation of information from different imaging modalities. Frequently, each modality is analyzed separately using, for instance, dimensionality reduction techniques, which result in a loss of mutual information. We propose a novel regularization-method to estimate the association between the brain structure features and a scalar outcome within the linear regression framework. Our regularization technique provides a principled approach to use external information from the structural brain connectivity and inform the estimation of the regression coefficients. Our proposal extends the classical Tikhonov regularization framework by defining a penalty term based on the structural connectivity-derived Laplacian matrix. Here, we address both theoretical and computational issues. The approach is first illustrated using simulated data and compared with other penalized regression methods. We then apply our regularization method to study the associations between the alcoholism phenotypes and brain cortical thickness using a diffusion imaging derived measure of structural connectivity. Using the proposed methodology in 148 young male subjects with a risk for alcoholism, we found a negative associations between cortical thickness and drinks per drinking day in bilateral caudal anterior cingulate cortex, left lateral OFC and left precentral gyrus.

Indexed as

Brain connectivityBrain structureLaplacian matrixLinear RegressionPenalized methodsStructured penalties

Identifiers

PMID31217828
PMCPMC6583926
OpenAlexW2924725371

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.