Evidence map›Paper›PMID 31217334›Full record

ArticleScience translational medicine2019

Epigenetic activation and memory at a

Joseph Yusup Shin, James Daniel Beckett, Rustam Bagirzadeh, Tyler J Creamer, Ami A Shah, Zsuzsanna McMahan, Julie J Paik, Margaret M Sampedro, Elena G MacFarlane, Michael A Beer and 3 more

Abstract read
In one paragraph

Article in Science translational medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. BRD4 inhibition mitigates acute and chronic corneal injury following topical nitrogen mustard exposure.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
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  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. EphB2 Receptor Promotes Dermal Fibrosis in Systemic Sclerosis.Arthritis & rheumatology (Hoboken, N.J.) · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Joseph Yusup ShinMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. hdietz@jhmi.edu jshin50@jhmi.edu.ORCID 0000-0002-3760-4321
James Daniel BeckettMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-8228-8244
Rustam BagirzadehMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Tyler J CreamerMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0003-1872-5248
Ami A ShahDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Zsuzsanna McMahanDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Julie J PaikDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Margaret M SampedroDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.ORCID 0000-0001-8276-6234
Elena G MacFarlaneMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-5677-6842
Michael A BeerMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.ORCID 0000-0001-9955-3809
Daniel WarrenDepartment of Surgery, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Fredrick M WigleyDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
Harry C DietzMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. hdietz@jhmi.edu jshin50@jhmi.edu.ORCID 0000-0002-6856-0165

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI Rosalie Wollett · 1985 to 2026
$208.6M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
Sample Processing and Immunoassay Research CoreP30AR070254 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI Antony Rosen · 2016 to 2026
$8.9M
Systematic Identification of Core Regulatory Circuitry from ENCODE DataU01HG009380 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI BEER, MICHAEL A · 2017 to 2021
$2.6M
SVM-based Analysis of the Fine Scale Structure of Regulatory ElementsR01HG007348 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI BEER, MICHAEL A · 2013 to 2017
$2.3M
Mechanistic and Therapeutic Investigations of SclerodermaR01AR068379 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI DIETZ, HARRY C., III, WARREN, DANIEL S · 2016 to 2020
$1.8M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA006973NHGRI NIH HHS R01 HG007348NHGRI NIH HHS U01 HG009380NIAMS NIH HHS P30 AR070254NIAMS NIH HHS R01 AR068379NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

In systemic sclerosis (SSc), previously healthy adults develop an inflammatory prodrome with subsequent progressive fibrosis of the skin and viscera. SSc has a weak signature for genetic contribution, and there are few pathogenic insights or targeted treatments for this condition. Here, chromatin accessibility and transcriptome profiling coupled with targeted epigenetic editing revealed constitutive activation of a previously unannotated transforming growth factor-β2 (

Indexed as

Bromodomain Containing ProteinsCell Cycle ProteinsEpigenesis, GeneticFibroblastsFibrosisHistone AcetyltransferasesHumansNF-kappa BScleroderma, SystemicSkinTranscription FactorsTransforming Growth Factor betaTransforming Growth Factor beta2Tumor Necrosis Factor-alphaBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsHistone AcetyltransferasesNF-kappa BTranscription FactorsTransforming Growth Factor betaTransforming Growth Factor beta2Tumor Necrosis Factor-alpha

Identifiers

PMID31217334
PMCPMC6995475

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.