Evidence map›Paper›PMID 31216712›Full record

ArticleViruses2019

Isolation of a Novel Reassortant Highly Pathogenic Avian Influenza (H5N2) Virus in Egypt.

Naglaa M Hagag, Ahmed M Erfan, Mohamed El-Husseiny, Azhar G Shalaby, Mohamed A Saif, Maram M Tawakol, Ahmed A Nour, Abdullah A Selim, Abdel-Satar Arafa, Mohamed K Hassan and 7 more

Abstract read
In one paragraph

Article in Viruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  17. H5 Influenza Viruses in Egypt.Cold Spring Harbor perspectives in medicine · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Naglaa M HagagNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. naglaahagagahri@gmail.com.
Ahmed M ErfanNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. Ahmed.erfan10000@gmail.com.ORCID 0000-0001-6432-8898
Mohamed El-HusseinyNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. olivera_2006@yahoo.com.
Azhar G ShalabyNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. azhargaber0@gmail.com.
Mohamed A SaifNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. mohamed_saif85@hotmail.com.
Maram M TawakolNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. maram_salah2020@yahoo.com.
Ahmed A NourNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. mada_boky@yahoo.com.
Abdullah A SelimNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. abdullahselim@yahoo.com.
Abdel-Satar ArafaNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. araby85@hotmail.com.
Mohamed K HassanNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. mkahassan2020@gmail.com.
Wafaa M M HassanNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. fooaaa@live.com.
Hanan A FahmyNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. dr.hananfahmy@gmail.com.
Essam IbraheemNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. essampath61@yahoo.com.
Mohamed AttiaGeneral Organization for Veterinary Services, Nadi El-Said Street P.O. Box, 12619 Dokki, Cairo, Dokki-Giza, Egypt. ashrafatea@yahoo.com.
Ali M M AbdelhakimGeneral Organization for Veterinary Services, Nadi El-Said Street P.O. Box, 12619 Dokki, Cairo, Dokki-Giza, Egypt. Hakam2060@gmail.com.
Momtaz A ShaheinNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. momtaz.shahein@yahoo.com.
Mahmoud M NaguibNational Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, 7 Nadi El-Seid Street, 12618 Dokki, Cairo, Dokki-Giza, Egypt. Mahmoud.naguib@imbim.uu.se.ORCID 0000-0001-6876-8903

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Highly pathogenic avian influenza (HPAI) H5N1 and H5N8 have become endemic among domestic poultry in Egypt since 2006 and 2016, respectively. In parallel, the low pathogenic avian influenza H9N2 virus has been endemic since 2010. Despite the continuous circulation of these subtypes for several years, no natural reassortant has been detected so far among the domestic poultry population in Egypt. In this study, the HPAI (H5N2) virus was isolated from a commercial duck farm, giving evidence of the emergence of the first natural reassortment event in domestic poultry in Egypt. The virus was derived as a result of genetic reassortment between avian influenza viruses of H5N8 and H9N2 subtypes circulating in Egypt. The exchange of the neuraminidase segment and high number of acquired mutations might be associated with an alteration in the biological propensities of this virus.

Indexed as

AnimalsDucksEgyptInfluenza A Virus, H5N2 SubtypeInfluenza in BirdsReassortant VirusesAvian influenzaEgyptH5N2H5N8H9N2poultryreassortment

Identifiers

PMID31216712
PMCPMC6631101

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.