Evidence map›Paper›PMID 31216043›Full record

ArticleNucleic acids research2019

Reversible ADP-ribosylation of RNA.

Deeksha Munnur, Edward Bartlett, Petra Mikolčević, Ilsa T Kirby, Johannes Gregor Matthias Rack, Andreja Mikoč, Michael S Cohen, Ivan Ahel

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 154 citations in OpenAlex.

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48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Deeksha MunnurSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
Edward BartlettSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
Petra MikolčevićDivision of Molecular Biology, Ruđer Bošković Institute, Zagreb, Croatia.
Ilsa T KirbyProgram in Chemical Biology, Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97239, USA.
Johannes Gregor Matthias RackSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
Andreja MikočDivision of Molecular Biology, Ruđer Bošković Institute, Zagreb, Croatia.
Michael S CohenProgram in Chemical Biology, Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, OR 97239, USA.
Ivan AhelSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
University of Oxford · GBOregon Health & Science University · USRudjer Boskovic Institute · HR

Funding

Decoding protein MARylation networks in astrocytes using chemical biology approachesR01NS088629 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI COHEN, MICHAEL S · 2014 to 2024
$4.2M
Biotechnology and Biological Sciences Research CouncilCancer Research UK 22284NINDS NIH HHS R01 NS088629Wellcome Trust 101794Wellcome Trust 210634
6 · The paper itself

Abstract

ADP-ribosylation is a reversible chemical modification catalysed by ADP-ribosyltransferases such as PARPs that utilize nicotinamide adenine dinucleotide (NAD+) as a cofactor to transfer monomer or polymers of ADP-ribose nucleotide onto macromolecular targets such as proteins and DNA. ADP-ribosylation plays an important role in several biological processes such as DNA repair, transcription, chromatin remodelling, host-virus interactions, cellular stress response and many more. Using biochemical methods we identify RNA as a novel target of reversible mono-ADP-ribosylation. We demonstrate that the human PARPs - PARP10, PARP11 and PARP15 as well as a highly diverged PARP homologue TRPT1, ADP-ribosylate phosphorylated ends of RNA. We further reveal that ADP-ribosylation of RNA mediated by PARP10 and TRPT1 can be efficiently reversed by several cellular ADP-ribosylhydrolases (PARG, TARG1, MACROD1, MACROD2 and ARH3), as well as by MACROD-like hydrolases from VEEV and SARS viruses. Finally, we show that TRPT1 and MACROD homologues in bacteria possess activities equivalent to the human proteins. Our data suggest that RNA ADP-ribosylation may represent a widespread and physiologically relevant form of reversible ADP-ribosylation signalling.

Indexed as

ADP-RibosylationAdenosine DiphosphateAdenosine Diphosphate RiboseADP Ribose TransferasesAnimalsCatalysisChromatinDNA RepairDNA Repair EnzymesDNA, Single-StrandedEscherichia coliHumansHydrolasesMiceNADPhosphorylationAdenosine DiphosphateAdenosine Diphosphate RiboseADP Ribose TransferasesChromatinDNA Repair EnzymesDNA, Single-StrandedHydrolasesMACROD2 protein, humanNADPARP10 protein, humanPhosphotransferases (Alcohol Group Acceptor)Poly(ADP-ribose) PolymerasesProto-Oncogene ProteinsRNATrpt1 protein, mouse

Identifiers

PMID31216043
PMCPMC6582358
OpenAlexW2949222247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.