Evidence map›Paper›PMID 31215115›Full record

ArticleHuman mutation2019

Mutations in GDF11 and the extracellular antagonist, Follistatin, as a likely cause of Mendelian forms of orofacial clefting in humans.

Timothy C Cox, Andrew C Lidral, Jason C McCoy, Huan Liu, Liza L Cox, Ying Zhu, Ryan D Anderson, Lina M Moreno Uribe, Deepti Anand, Mei Deng and 20 more

Open access · bronzeAbstract read
In one paragraph

Article in Human mutation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

  1. Trial
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  6. GDF11 and aging biology - controversies resolved and pending.The journal of cardiovascular aging · 2023
    Article
  7. Article
  8. Article
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  10. MeCP2 regulateseLife · 2023
    Article
  11. Article
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  15. Heterozygous loss-of-function variants significantly expand the phenotypes associated with loss of GDF11.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 13 institutions in 3 countries.

Timothy C CoxDivision of Craniofacial Medicine, Department of Pediatrics, University of Washington, Seattle, Washington.ORCID 0000-0001-8015-5528
Andrew C LidralLidral Orthodontics, Rockford, Michigan.
Jason C McCoyDepartment of Molecular Genetics, Biochemistry, and Microbiology, University of Cincinnati, Cincinnati, Ohio.
Huan LiuDepartment of Anatomy and Cell Biology and Anatomy, University of Iowa, Iowa City, Iowa.ORCID 0000-0002-9947-6687
Liza L CoxDivision of Craniofacial Medicine, Department of Pediatrics, University of Washington, Seattle, Washington.
Ying ZhuNew South Wales Health Pathology, Prince of Wales Hospital, Randwick, New South Wales, Australia.
Ryan D AndersonDepartment of Oral & Craniofacial Science, School of Dentistry, University of Missouri-Kansas City, Kansas City, Missouri.
Lina M Moreno UribeDepartment of Orthodontics & the Iowa Institute for Oral Health Research, University of Iowa, Iowa City, Iowa.
Deepti AnandDepartment of Biological Sciences, University of Delaware, Newark, Delaware.
Mei DengBirth Defects Research Laboratory, University of Washington, Seattle, Washington.
Chika T RichterDepartment of Orthodontics & the Iowa Institute for Oral Health Research, University of Iowa, Iowa City, Iowa.
Nichole L NideyDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Jennifer M StandleyDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Elizabeth E BlueDivision of Medical Genetics, Department of Medicine, University of Washington, Seattle, Washington.
Jessica X ChongDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington.
Joshua D SmithDepartment of Genome Sciences, University of Washington, Seattle, Washington.
Edwin P KirkNew South Wales Health Pathology, Prince of Wales Hospital, Randwick, New South Wales, Australia.
Hanka VenselaarCentre for Molecular and Biomolecular Informatics, Radboud University Medical Centre, Nijmegen, The Netherlands.
Katy N KrahnUVA Center for Advanced Medical Analytics, School of Medicine, University of Virginia, Charlottesville, Virginia.
Hans van BokhovenDepartment of Human Genetics, Radboud University Medical Centre, Nijmegen, The Netherlands.
Huiqing ZhouDepartment of Human Genetics, Radboud University Medical Centre, Nijmegen, The Netherlands.
Robert A CornellDepartment of Anatomy and Cell Biology and Anatomy, University of Iowa, Iowa City, Iowa.
Ian A GlassBirth Defects Research Laboratory, University of Washington, Seattle, Washington.
Michael J BamshadDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington.
Deborah A NickersonDepartment of Genome Sciences, University of Washington, Seattle, Washington.
Jeffrey C MurrayDepartment of Pediatrics, University of Iowa, Iowa City, Iowa.
Salil A LachkeDepartment of Biological Sciences, University of Delaware, Newark, Delaware.ORCID 0000-0001-8845-010X
Thomas B ThompsonDepartment of Molecular Genetics, Biochemistry, and Microbiology, University of Cincinnati, Cincinnati, Ohio.
Michael F BuckleyNew South Wales Health Pathology, Prince of Wales Hospital, Randwick, New South Wales, Australia.
Tony RoscioliNew South Wales Health Pathology, Prince of Wales Hospital, Randwick, New South Wales, Australia.
University of Iowa · USUniversity of Washington · USRadboud University Nijmegen · NLPrince of Wales Hospital · AUSeattle Children's Hospital · USUniversity of Cincinnati · USUniversity of Delaware · USAmerican Association of Orthodontists · USHunter Genetics · AUUniversity of Missouri–Kansas City · USUniversity of Virginia Medical Center · USUniversity of Washington Medical Center · USUNSW Sydney · AU

Funding

UW Center for Mendelian GenomicsU54HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2012 to 2015
$20.0M
LABORATORY OF DEVELOPMENTAL BIOLOGYR24HD000836 · NICHD · UNIVERSITY OF WASHINGTON · PI Ian Amos Glass · 1995 to 2026
$16.9M
UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
FaceBase 2 Coordinating CenterU01DE024449 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KESSELMAN, CARL · 2014 to 2018
$10.2M
Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
Dissecting the transcriptional network governing differentiation of peridermR01DE023575 · NIDCR · UNIVERSITY OF WASHINGTON · PI CORNELL, ROBERT AARON, SCHUTTE, BRIAN C · 2013 to 2023
$4.3M
Cleft Lip Genetics: A Multi Center International ConsortiumR01DE014667 · NIDCR · UNIVERSITY OF IOWA · PI LIDRAL, ANDREW C · 2001 to 2009
$4.2M
RESEARCH ON FUNCTIONAL GENOMICS, IMAGE ANALYSIS AND RESCUE OF CLEFT PALATEU01DE020065 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHAI, YANG · 2009 to 2013
$2.1M
Structure-Function Investigation of DAN-mediated BMP AntagonismR01GM114640 · NIGMS · UNIVERSITY OF CINCINNATI · PI THOMPSON, THOMAS B · 2015 to 2018
$1.7M
MOLECULAR GENETIC EPIDEMIOLOGY OF CLEFT LIP AND PALATER01DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1988 to 2003
$1.5M
Global Gene Expression Atlas of Craniofacial Development (Research Project)U01DE020049 · NIDCR · CINCINNATI CHILDRENS HOSP MED CTR · PI POTTER, S. STEVEN · 2009 to 2013
$1.4M
Structural insight into the signaling and regulation of GDF8 and GDF11R01GM127726 · NIGMS · UNIVERSITY OF CINCINNATI · PI THOMPSON, THOMAS B · 2018 to 2019
$744k
American Association of Orthodontists Foundation Faculty Development AwardCleft Palate FoundationLaurel Foundation Endowment for Pediatric Craniofacial ResearchMarch of Dimes Foundation 6-FY01-616March of Dimes Foundation FY98-0718National Health and Medical Research Council AU/1/BA51117National Institute of Child Health and Human Development HD000836NHGRI NIH HHS HG006493NHGRI NIH HHS UM1 HG006493NICHD NIH HHS R24 HD000836NIDCR NIH HHS 1U01DE024449-01NIDCR NIH HHS DE008559NIDCR NIH HHS DE014667NIDCR NIH HHS DE023575NIDCR NIH HHS DE024776NIDCR NIH HHS R01 DE014667NIDCR NIH HHS R01 DE023575NIDCR NIH HHS R03 DE024776NIDCR NIH HHS R37 DE008559NIDCR NIH HHS U01 DE020049NIDCR NIH HHS U01 DE020065NIDCR NIH HHS U01 DE024449NIGMS NIH HHS GM114640NIGMS NIH HHS R01 GM114640NIGMS NIH HHS R01 GM127726Ohio State University College of Dentistry Start UpUniversity of Iowa Start Up
6 · The paper itself

Abstract

Cleft lip with or without cleft palate (CL/P) is generally viewed as a complex trait with multiple genetic and environmental contributions. In 70% of cases, CL/P presents as an isolated feature and/or deemed nonsyndromic. In the remaining 30%, CL/P is associated with multisystem phenotypes or clinically recognizable syndromes, many with a monogenic basis. Here we report the identification, via exome sequencing, of likely pathogenic variants in two genes that encode interacting proteins previously only linked to orofacial clefting in mouse models. A variant in GDF11 (encoding growth differentiation factor 11), predicting a p.(Arg298Gln) substitution at the Furin protease cleavage site, was identified in one family that segregated with CL/P and both rib and vertebral hypersegmentation, mirroring that seen in Gdf11 knockout mice. In the second family in which CL/P was the only phenotype, a mutation in FST (encoding the GDF11 antagonist, Follistatin) was identified that is predicted to result in a p.(Cys56Tyr) substitution in the region that binds GDF11. Functional assays demonstrated a significant impact of the specific mutated amino acids on FST and GDF11 function and, together with embryonic expression data, provide strong evidence for the importance of GDF11 and Follistatin in the regulation of human orofacial development.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseMutationAllelesAmino Acid SubstitutionBone Morphogenetic ProteinsCell LineCleft LipComputational BiologyExome SequencingFollistatinGenomicsGrowth Differentiation FactorsHumansModels, MolecularPedigreeBone Morphogenetic ProteinsFollistatinGDF11 protein, humanGrowth Differentiation Factorscleft lipcleft palatefollistatinGDF11vertebral hypersegmentation

Identifiers

PMID31215115
PMCPMC6764866
OpenAlexW2950145545

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.