Evidence map›Paper›PMID 31214711›Full record

ArticleJournal of the National Cancer Institute2020

Germline Pathogenic Variants in 7636 Japanese Patients With Prostate Cancer and 12 366 Controls.

Yukihide Momozawa, Yusuke Iwasaki, Makoto Hirata, Xiaoxi Liu, Yoichiro Kamatani, Atsushi Takahashi, Kokichi Sugano, Teruhiko Yoshida, Yoshinori Murakami, Koichi Matsuda and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of the National Cancer Institute, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed, 2 pooled it
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 2 syntheses or guidelines pooled it, 95 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Review
  6. Comprehensive evidence for the pathogenicity of theJournal of medical genetics · 2026
    Article
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  15. Breast Cancer Is Increased in Women With Primary Ovarian Insufficiency.The Journal of clinical endocrinology and metabolism · 2025
    Article
  16. Observational
  17. AreFrontiers in endocrinology · 2025
    Article
  18. Article
  19. Review
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Yukihide MomozawaLaboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Yusuke IwasakiLaboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Makoto HirataDepartment of Genetic Medicine and Services, National Cancer Centre Hospital, Chuo-ku, Tokyo, Japan.
Xiaoxi LiuLaboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Yoichiro KamataniLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Atsushi TakahashiLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
Kokichi SuganoDepartment of Genetic Medicine and Services, National Cancer Centre Hospital, Chuo-ku, Tokyo, Japan.
Teruhiko YoshidaDepartment of Genetic Medicine and Services, National Cancer Centre Hospital, Chuo-ku, Tokyo, Japan.
Yoshinori MurakamiDivision of Molecular Pathology, Department of Cancer Biology, Institute of Medical Science.
Koichi MatsudaGraduate School of Frontier Sciences, Minato-ku, Tokyo, Japan.
Hidewaki NakagawaThe University of Tokyo, Minato-ku, Tokyo, Japan; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Minato-ku, Tokyo, Japan.
Amanda B SpurdleDivision of Genetics and Population Health, QIMR Berghofer Medical Research Institute, Brisbane, Herston, Queensland, Australia.
Michiaki KuboRIKEN Center for Integrative Medical Sciences, Yokohama City, Kanagawa, Japan.
RIKEN Center for Integrative Medical Sciences · JPNational Cancer Centre Japan · JPNational Cerebral and Cardiovascular Center · JPQIMR Berghofer Medical Research Institute · AUUbe Frontier University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGenetic testing has been conducted in patients with prostate cancer (PCa) using multigene panels, but no centralized guidelines for genetic testing exist. To overcome this limitation, we investigated the demographic and clinical characteristics of patients with pathogenic variants.

methodsWe sequenced eight genes associated with hereditary PCa in 7636 unselected Japanese patients with PCa and 12 366 male, cancer-free control individuals. We assigned clinical significance for all 1456 variants using the American College of Medical Genetics and Genomics guidelines and ClinVar. We compared the frequency of carriers bearing pathogenic variants between cases and control participants with calculated PCa risk in each gene and documented the demographic and clinical characteristics of patients bearing pathogenic variants. All statistical tests were two-sided.

resultsWe identified 136 pathogenic variants, and 2.9% of patients and 0.8% of control individuals had a pathogenic variant. Association with PCa risk was statistically significant for variants in BRCA2 (P < .001, odds ratio [OR] = 5.65, 95% confidence interval [CI] = 3.55 to 9.32), HOXB13 (P < .001, OR = 4.73, 95% CI = 2.84 to 8.19), and ATM (P < .001, OR = 2.86, 95% CI = 1.63 to 5.15). We detected recurrent new pathogenic variants such as p.Gly132Glu of HOXB13. Patients with pathogenic variants were 2.0 years younger at diagnosis and more often had smoking and alcohol drinking histories as well as family histories of breast, pancreatic, lung, and liver cancers.

conclusionsThis largest sequencing study of PCa heredity provides additional evidence supporting the latest consensus among clinicians for developing genetic testing guidelines for PCa.

Indexed as

Germ-Line MutationAgedAsian PeopleAtaxia Telangiectasia Mutated ProteinsBRCA2 ProteinCase-Control StudiesHomeodomain ProteinsHumansJapanMaleMiddle AgedNeoplasm StagingProstatic NeoplasmsAtaxia Telangiectasia Mutated ProteinsATM protein, humanBRCA2 ProteinBRCA2 protein, humanHomeodomain ProteinsHOXB13 protein, human

Identifiers

PMID31214711
PMCPMC7156928
OpenAlexW2949926407

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.