Evidence map›Paper›PMID 31213653›Full record

ArticleJournal of human genetics2019

Primary immunodeficiency with chronic enteropathy and developmental delay in a boy arising from a novel homozygous RIPK1 variant.

Yuri Uchiyama, Chong A Kim, Antonio Carlos Pastorino, José Ceroni, Patricia Picciarelli Lima, Mayra de Barros Dorna, Rachel Sayuri Honjo, Débora Bertola, Kohei Hamanaka, Atsushi Fujita and 6 more

Abstract readCase Reports
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In one paragraph

Article in Journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Monogenic disorders of the TNF signalling pathway.Nature reviews. Rheumatology · 2026
    Review
  4. Review
  5. Article
  6. For Better or Worse: The Impact of Necrotic Cell Death Modalities.Advances in experimental medicine and biology · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Functions of the RIP kinase family members in the skin.Cellular and molecular life sciences : CMLS · 2023
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Regulatory mechanisms of RIPK1 in cell death and inflammation.Seminars in cell & developmental biology · 2021
    Review
  19. Primary immune regulatory disorders: a growing universe of immune dysregulation.Current opinion in allergy and clinical immunology · 2020
    Review
  20. Dysregulation of Cell Death in Human Chronic Inflammation.Cold Spring Harbor perspectives in biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Yuri UchiyamaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Chong A KimClinical Genetics Unit, Instituto da Crianca, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Antonio Carlos PastorinoChildren's Institute, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
José CeroniClinical Genetics Unit, Instituto da Crianca, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Patricia Picciarelli LimaPatologia Ocular, Divisão de Anatomia Patologica, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Mayra de Barros DornaChildren's Institute, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Rachel Sayuri HonjoClinical Genetics Unit, Instituto da Crianca, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Débora BertolaClinical Genetics Unit, Instituto da Crianca, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, Brazil.
Kohei HamanakaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Atsushi FujitaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Satomi MitsuhashiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Satoko MiyatakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Atsushi TakataDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Noriko MiyakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Takeshi MizuguchiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan. tmizu@yokohama-cu.ac.jp.
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan. naomat@yokohama-cu.ac.jp.
Yokohama City University · JPHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRYokohama City University Hospital · JP

Funding

Japan Agency for Medical Research and Development (AMED) JP18dm0107090Japan Agency for Medical Research and Development (AMED) JP18ek0109301Japan Agency for Medical Research and Development (AMED) JP18ek0109348Japan Agency for Medical Research and Development (AMED) JP18kk020501MEXT | Japan Society for the Promotion of Science (JSPS) JP16H05160MEXT | Japan Society for the Promotion of Science (JSPS) JP16H05357MEXT | Japan Society for the Promotion of Science (JSPS) JP16H06254MEXT | Japan Society for the Promotion of Science (JSPS) JP17H01539MEXT | Japan Society for the Promotion of Science (JSPS) JP17H06994MEXT | Japan Society for the Promotion of Science (JSPS) JP17K10080MEXT | Japan Society for the Promotion of Science (JSPS) JP17K15630
6 · The paper itself

Abstract

Identification of genetic causes of primary monogenic immunodeficiencies would strengthen the current understanding of their immunopathology. Pathogenic variants in genes in association with tumor necrosis factor α (TNFα) signaling, including OTULIN, TNFAIP3, RBCK1, and RNF31 cause human congenital autoinflammatory diseases with/without immunodeficiency. RIPK1, encoding a receptor interacting serine/threonine kinase 1, is present in protein complexes mediating signal transduction including TNF receptor 1. Biallelic loss-of-function variants in RIPK1 were recently reported in individuals with primary immunodeficiency with intestinal bowel disease and arthritis. Here, we report a novel homozygous RIPK1 variant in a boy with immunodeficiency and chronic enteropathy. Our patient exhibited severe motor delay and mild intellectual disability, which were previously unknown. The present results are expected to deepen the current understanding of clinical features based on RIPK1 abnormalities.

Indexed as

HomozygoteLoss of Function MutationChildDevelopmental DisabilitiesHumansIntestinal DiseasesMalePrimary Immunodeficiency DiseasesReceptor-Interacting Protein Serine-Threonine KinasesSignal TransductionReceptor-Interacting Protein Serine-Threonine KinasesRIPK1 protein, human

Identifiers

PMID31213653
OpenAlexW2953152150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.