Evidence map›Paper›PMID 31213387›Full record

ReviewTrends in genetics : TIG2019

Transcriptional Control by Premature Termination: A Forgotten Mechanism.

Kinga Kamieniarz-Gdula, Nick J Proudfoot

Open access · hybridAbstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 169 citations in OpenAlex.

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  16. Reduced Usage ofPhenomics (Cham, Switzerland) · 2025
    Article
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40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Kinga Kamieniarz-GdulaSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford, OX1 3RE, UK; Department of Molecular and Cellular Biology, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland; Center for Advanced Technology, Adam Mickiewicz University, Umultowska 89c, 61-614 Poznań, Poland. Electronic address: kinga.kamieniarz-gdula@amu.edu.pl.
Nick J ProudfootSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford, OX1 3RE, UK.
University of Oxford · GB

Funding

Wellcome TrustWellcome Trust 107928/Z/15/Z
6 · The paper itself

Abstract

The concept of early termination as an important means of transcriptional control has long been established. Even so, its role in metazoan gene expression is underappreciated. Recent technological advances provide novel insights into premature transcription termination (PTT). This process is frequent, widespread, and can occur close to the transcription start site (TSS), or within the gene body. Stable prematurely terminated transcripts contribute to the transcriptome as instances of alternative polyadenylation (APA). Independently of transcript stability and function, premature termination opposes the formation of full-length transcripts, thereby negatively regulating gene expression, especially of transcriptional regulators. Premature termination can be beneficial or harmful, depending on its context. As a result, multiple factors have evolved to control this process.

Indexed as

Transcription, GeneticTranscription Termination, GeneticTranscriptomeAnimalsBacteriaCodon, NonsenseExonsGene Expression RegulationIntronsPlantsPolyadenylationRNA, MessengerRNA, UntranslatedTranscription Initiation SiteYeastsCodon, NonsenseRNA, MessengerRNA, Untranslatedalternative last exon (ALE)alternative polyadenylation (APA)intronic polyadenylation (IPA)premature transcription terminationtranscription attenuation

Identifiers

PMID31213387
PMCPMC7471841
OpenAlexW2943054090

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.