Evidence map›Paper›PMID 31211993›Full record

ArticleDevelopmental cell2019

Brd4 and P300 Confer Transcriptional Competency during Zygotic Genome Activation.

Shun Hang Chan, Yin Tang, Liyun Miao, Hiba Darwich-Codore, Charles E Vejnar, Jean-Denis Beaudoin, Damir Musaev, Juan P Fernandez, Maria D J Benitez, Ariel A Bazzini and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 172 citations in OpenAlex.

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  20. Quantifying Nascent Transcription in Early Embryogenesis.Methods in molecular biology (Clifton, N.J.) · 2025
    Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Shun Hang ChanDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Yin TangDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Liyun MiaoDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Hiba Darwich-CodoreDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Charles E VejnarDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Jean-Denis BeaudoinDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Damir MusaevDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Juan P FernandezDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Maria D J BenitezDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Ariel A BazziniDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA; Department of Molecular and Integrative Physiology, University of Kansas Medical Center, 3901 Rainbow Boulevard, Kansas City, KS 66160, USA.
Miguel A Moreno-MateosDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA. Electronic address: mamormat@upo.es.
Antonio J GiraldezDepartment of Genetics, Yale University School of Medicine, New Haven, CT 06510, USA; Stem Cell Center, Yale University School of Medicine, New Haven, CT 06510, USA; Yale Cancer Center, Yale University School of Medicine, New Haven, CT 06510, USA. Electronic address: antonio.giraldez@yale.edu.
Yale University · USYale Cancer Center · US

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Molecular mechanisms of the maternal to zygotic transitionR35GM122580 · NIGMS · YALE UNIVERSITY · PI Antonio J Giraldez · 2017 to 2026
$8.1M
The Role of MicroRNAs in Vertebrate DevelopmentR01GM081602 · NIGMS · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2007 to 2016
$2.9M
Functional analysis of the zebrafish genome through RNA-seq and ribosome profileR01HD074078 · NICHD · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2012 to 2016
$2.3M
Molecular Characterization of the microRNA Processing PathwaysR01GM101108 · NIGMS · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2012 to 2015
$2.0M
Analysis of the gene networks regulating the maternal to zygotic transitionR01GM103789 · NIGMS · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2012 to 2015
$1.7M
Molecular mechanisms of microRNA mediated regulationR01GM102251 · NIGMS · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2012 to 2015
$1.3M
A super-resolution microscope for research and educationS10OD020142 · OD · YALE UNIVERSITY · PI NATHANSON, MICHAEL H · 2015 to 2015
$600k
Howard Hughes Medical InstituteNICHD NIH HHS R01 HD074078NIGMS NIH HHS R01 GM081602NIGMS NIH HHS R01 GM101108NIGMS NIH HHS R01 GM102251NIGMS NIH HHS R01 GM103789NIGMS NIH HHS R35 GM122580NIGMS NIH HHS T32 GM007223NIH HHS S10 OD020142
6 · The paper itself

Abstract

The awakening of the genome after fertilization is a cornerstone of animal development. However, the mechanisms that activate the silent genome after fertilization are poorly understood. Here, we show that transcriptional competency is regulated by Brd4- and P300-dependent histone acetylation in zebrafish. Live imaging of transcription revealed that genome activation, beginning at the miR-430 locus, is gradual and stochastic. We show that genome activation does not require slowdown of the cell cycle and is regulated through the translation of maternally inherited mRNAs. Among these, the enhancer regulators P300 and Brd4 can prematurely activate transcription and restore transcriptional competency when maternal mRNA translation is blocked, whereas inhibition of histone acetylation blocks genome activation. We conclude that P300 and Brd4 are sufficient to trigger genome-wide transcriptional competency by regulating histone acetylation on the first zygotic genes in zebrafish. This mechanism is critical for initiating zygotic development and developmental reprogramming.

Indexed as

Embryonic DevelopmentGene Expression Regulation, DevelopmentalGenomeAnimalsE1A-Associated p300 ProteinEmbryo, NonmammalianRegulatory Sequences, Nucleic AcidTranscriptional ActivationTranscription FactorsTranscriptomeZebrafishZebrafish ProteinsZygoteE1A-Associated p300 ProteinTranscription FactorsZebrafish Proteinscell reprogrammingembryonic developmentgenome activationhistone modificationslive imagingmaternal-to-zygotic transitiontranscriptiontranscriptional activationzebrafishzygotic genome activation

Identifiers

PMID31211993
PMCPMC7201981
OpenAlexW2949230885

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.