ArticleEmerging infectious diseases2019
Mitochondrial Junction Region as Genotyping Marker for Cyclospora cayetanensis.
Article in Emerging infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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Who cites it
23 citing papers in PubMed, 32 citations in OpenAlex.
- Assessing the sequencing success and analytical specificity of a targeted amplicon deep sequencing workflow for genotyping the foodborne parasiteJournal of clinical microbiology · 2025Article
- Evaluation of the Increased Genetic Resolution and Utility for Source Tracking of a Recently Developed Method for GenotypingMicroorganisms · 2024Article
- Evaluation of nuclear and mitochondrial phylogenetics for the subtyping of Cyclospora cayetanensis.Parasitology research · 2023Article
- The limit of detection of the BioFire® FilmArray® gastrointestinal panel for the foodborne parasite Cyclospora cayetanensis.Diagnostic microbiology and infectious disease · 2023Article
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- Novel insights on the genetic population structure of human-infectingCurrent research in parasitology & vector-borne diseases · 2023Article
- Development of a targeted amplicon sequencing method for genotypingFrontiers in microbiology · 2023Article
- Evaluation of various distance computation methods for construction of haplotype-based phylogenies from large MLST datasets.Molecular phylogenetics and evolution · 2022Article
- Targeted next generation sequencing ofHeliyon · 2022Article
- Hastening Progress inMicroorganisms · 2022Article
- Development of a Molecular Marker Based on the Mitochondrial Genome for Detection ofMicroorganisms · 2022Article
- Genotyping Cyclospora cayetanensis From Multiple Outbreak Clusters With An Emphasis on a Cluster Linked to Bagged Salad Mix-United States, 2020.The Journal of infectious diseases · 2022Article
- Genotyping CanadianMicroorganisms · 2022Article
- Life Cycle and Transmission ofMicroorganisms · 2022Review
- Investigation of USEpidemiology and infection · 2021Article
- Cyclospora Cayetanensis-Major Outbreaks from Ready to Eat Fresh Fruits and Vegetables.Foods (Basel, Switzerland) · 2020Review
- Evaluation of an ensemble-based distance statistic for clustering MLST datasets using epidemiologically defined clusters of cyclosporiasis.Epidemiology and infection · 2020Article
- Molecular typing of Cyclospora cayetanensis in produce and clinical samples using targeted enrichment of complete mitochondrial genomes and next-generation sequencing.Parasites & vectors · 2020Article
- Review
Corrections and comments
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Authors and funding
9 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cyclosporiasis is an infection caused by Cyclospora cayetanensis, which is acquired by consumption of contaminated fresh food or water. In the United States, cases of cyclosporiasis are often associated with foodborne outbreaks linked to imported fresh produce or travel to disease-endemic countries. Epidemiologic investigation has been the primary method for linking outbreak cases. A molecular typing marker that can identify genetically related samples would be helpful in tracking outbreaks. We evaluated the mitochondrial junction region as a potential genotyping marker. We tested stool samples from 134 laboratory-confirmed cases in the United States by using PCR and Sanger sequencing. All but 2 samples were successfully typed and divided into 14 sequence types. Typing results were identical among samples within each epidemiologically defined case cluster for 7 of 10 clusters. These findings suggest that this marker can distinguish between distinct case clusters and might be helpful during cyclosporiasis outbreak investigations.
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