Evidence map›Paper›PMID 31211169›Full record

ArticleAnnals of clinical and translational neurology2019

miRNA contributions to pediatric-onset multiple sclerosis inferred from GWAS.

Brooke Rhead, Xiaorong Shao, Jennifer S Graves, Tanuja Chitnis, Amy T Waldman, Timothy Lotze, Teri Schreiner, Anita Belman, Lauren Krupp, Benjamin M Greenberg and 22 more

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical and translational neurology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 19 institutions in 1 country.

Brooke RheadDivision of Epidemiology School of Public Health University of California Berkeley California.ORCID https://orcid.org/0000-0002-1839-4883
Xiaorong ShaoDivision of Epidemiology School of Public Health University of California Berkeley California.
Jennifer S GravesDepartment of Neurology University of California San Francisco California.
Tanuja ChitnisPartners Pediatric Multiple Sclerosis Center Massachusetts General Hospital for Children Boston Massachusetts.
Amy T WaldmanDivision of Neurology Children's Hospital of Philadelphia Philadelphia Pennsylvania.
Timothy LotzeBlue Bird Circle Multiple Sclerosis Center Baylor College of Medicine Houston Texas.
Teri SchreinerChildren's Hospital Colorado University of Colorado Denver Colorado.
Anita BelmanLourie Center for Pediatric MS Stony Brook Children's Hospital Stony Brook New York.
Lauren KruppLourie Center for Pediatric MS Stony Brook Children's Hospital Stony Brook New York.
Benjamin M GreenbergDepartment of Neurology and Neurotherapeutics University of Texas Southwestern Dallas Texas.
Bianca Weinstock-GuttmanPediatric Multiple Sclerosis Center Jacobs Neurological Institute SUNY Buffalo Buffalo New York.
Gregory AaenPediatric MS Center at Loma Linda University Children's Hospital Loma Linda California.
Jan M TillemaMayo Clinic's Pediatric MS Center Rochester Minnesota.
Moses RodriguezMayo Clinic's Pediatric MS Center Rochester Minnesota.
Janace HartUniversity of California, San Francisco Regional Pediatric MS Center Neurology San Francisco California.
Stacy CaillierUniversity of California, San Francisco Regional Pediatric MS Center Neurology San Francisco California.
Jayne NessUniversity of Alabama Center for Pediatric-onset Demyelinating Disease Children's Hospital of Alabama Birmingham Alabama.
Yolanda HarrisUniversity of Alabama Center for Pediatric-onset Demyelinating Disease Children's Hospital of Alabama Birmingham Alabama.
Jennifer RubinDepartment of Pediatric Neurology Northwestern Feinberg School of Medicine Chicago Illinois.
Meghan S CandeeDivision of Pediatric Neurology University of Utah Primary Children's Hospital Salt Lake City Utah.
Mark GormanBoston Children's Hospital Boston Massachusetts.
Leslie BensonBoston Children's Hospital Boston Massachusetts.
Soe MarPediatric-onset Demyelinating Diseases and Autoimmune Encephalitis Center St. Louis Children's Hospital Washington University School of Medicine St. Louis Missouri.
Ilana KahnChildren's National Medical Center Washington District of Columbia.
John RoseDepartment of Neurology University of Utah School of Medicine Salt Lake City Utah.
T Charles CasperDepartment of Pediatrics University of Utah School of Medicine Salt Lake City Utah.
Hong QuachDivision of Epidemiology School of Public Health University of California Berkeley California.
Diana QuachDivision of Epidemiology School of Public Health University of California Berkeley California.
Catherine SchaeferKaiser Permanente Division of Research Oakland California.
Emmanuelle WaubantDepartment of Neurology University of California San Francisco California.ORCID https://orcid.org/0000-0001-5188-0157
Lisa F BarcellosDivision of Epidemiology School of Public Health University of California Berkeley California.
US Network of Pediatric MS Centers
University of California, Berkeley · USUniversity of California, San Francisco · USBoston Children's Hospital · USKaiser Permanente · USMayo Clinic · USStony Brook Children's Hospital · USUniversity of Alabama · USUniversity of Utah · USBaylor College of Medicine · USChildren's Hospital Colorado · USChildren's Hospital of Philadelphia · USChildren's National · USJacobs Institute · USLoma Linda University Children's Hospital · USMassachusetts General Hospital · USNorthwestern University · USPrimary Children's Hospital · USSt. Louis Children's Hospital · USThe University of Texas Southwestern Medical Center · US

Funding

Utah Center for Clinical and Translational ScienceUL1TR002538 · NCATS · UNIVERSITY OF UTAH · PI HESS, RACHEL, MAJERSIK, JENNIFER JUHL · 2018 to 2022
$26.0M
The Identification of Risk Factors for the Complex MS PhenotypeR01AI076544 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI BARCELLOS, LISA F · 2008 to 2012
$3.6M
Novel Strategies to Identify GxE Contributions to MS PathogenesisR01ES017080 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BARCELLOS, LISA F · 2011 to 2015
$3.0M
Environmental and genetic risk factors for pediatric MSR01NS071463 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WAUBANT, EMMANUELLE LAURENCE · 2010 to 2015
$2.8M
Genetic and non-genetic risk factors in MSR01NS049510 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BARCELLOS, LISA F · 2005 to 2009
$2.7M
Establishing the Causal Role of Low Vitamin D in Multiple SclerosisF31NS096885 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI RHEAD, BROOKE · 2016 to 2019
$125k
NCATS NIH HHS UL1 TR002538NIAID NIH HHS R01 AI076544NIEHS NIH HHS R01 ES017080NINDS NIH HHS F31 NS096885NINDS NIH HHS R01 NS049510NINDS NIH HHS R01 NS071463
6 · The paper itself

Abstract

objectiveOnset of multiple sclerosis (MS) occurs in childhood for approximately 5% of cases (pediatric MS, or ped-MS). Epigenetic influences are strongly implicated in MS pathogenesis in adults, including the contribution from microRNAs (miRNAs), small noncoding RNAs that affect gene expression by binding target gene mRNAs. Few studies have specifically examined miRNAs in ped-MS, but individuals developing MS at an early age may carry a relatively high burden of genetic risk factors, and miRNA dysregulation may therefore play a larger role in the development of ped-MS than in adult-onset MS. This study aimed to look for evidence of miRNA involvement in ped-MS pathogenesis.

methodsGWAS results from 486 ped-MS cases and 1362 controls from the U.S. Pediatric MS Network and Kaiser Permanente Northern California membership were investigated for miRNA-specific signals. First, enrichment of miRNA-target gene network signals was evaluated using MIGWAS software. Second, SNPs in miRNA genes and in target gene binding sites (miR-SNPs) were tested for association with ped-MS, and pathway analysis was performed on associated target genes.

resultsMIGWAS analysis showed that miRNA-target gene signals were enriched in GWAS (

interpretationEvidence from GWAS suggests that miRNAs play a role in ped-MS pathogenesis by affecting immune signaling and other pathways. Candidate biomarker miRNA-target gene pairs should be further studied for diagnostic, prognostic, and/or therapeutic utility.

Indexed as

AdolescentBinding SitesBiomarkersCaliforniaChildFemaleGene Expression ProfilingGene Regulatory NetworksGenome-Wide Association StudyHumansMaleMicroRNAsMultiple SclerosisPolymorphism, Single NucleotideSignal TransductionBiomarkersMicroRNAs

Identifiers

PMID31211169
PMCPMC6562070
OpenAlexW2945663349

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.