Evidence map›Paper›PMID 31210222›Full record

ArticleMetallomics : integrated biometal science2019

Isolated Saccharomyces cerevisiae vacuoles contain low-molecular-mass transition-metal polyphosphate complexes.

Trang Q Nguyen, Nathaniel Dziuba, Paul A Lindahl

Open access · greenAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Yeast Mitochondria Import Aqueous FeJournal of the American Chemical Society · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The phosphate language of fungi.Trends in microbiology · 2022
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Zinc homeostasis in the secretory pathway in yeast.Current opinion in chemical biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Trang Q NguyenDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. Lindahl@chem.tamu.edu.
Nathaniel DziubaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.
Paul A LindahlDepartment of Chemistry, Texas A&M University, College Station, TX 77843-3255, USA. Lindahl@chem.tamu.edu and Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0001-8307-9647
In-Q-Tel · USTexas A&M University · US

Funding

Iron Trafficking and Regulation in Biological SystemsR35GM127021 · NIGMS · TEXAS A&M UNIVERSITY · PI PAUL A. LINDAHL · 2018 to 2026
$3.4M
NIGMS NIH HHS R35 GM127021
6 · The paper itself

Abstract

Vacuoles play major roles in the trafficking, storage, and homeostasis of metal ions in fungi and plants. In this study, 29 batches of vacuoles were isolated from Saccharomyces cerevisiae. Flow-through solutions (FTS) obtained by passing vacuolar extracts through a 10 kDa cut-off membrane were characterized for metal content using an anaerobic liquid chromatography system interfaced to an online ICP-MS. Nearly all iron, zinc, and manganese ions in these solutions were present as low-molecular-mass (LMM) complexes. Metal-detected peaks with masses between 500-1700 Da dominated; phosphorus-detected peaks generally comigrated. The distribution of metal:polyphosphate complexes was dominated by particular chain-lengths rather than a broad binomial distribution. Similarly treated synthetic FeIII polyphosphate complexes showed similar peaks. Treatment with a phosphatase disrupted the LMM metal-bound species in vacuolar FTSs. These results indicated metal:polyphosphate complexes 6-20 phosphate units in length and coordinated by 1-3 metals on average per chain. The speciation of iron in FTSs from iron-deficient cells was qualitatively similar, but intensities were lower. Under healthy conditions, nearly all copper ions in vacuolar FTSs were present as 1-2 species with masses between 4800-7800 Da. The absence of these high-mass peaks in vacuolar FTS from cup1Δ cells suggests that they were due to metallothionein, Cup1. Disrupting copper homeostasis increased the amount of LMM copper:polyphosphate complexes in vacuoles (masses between 1500-1700 Da). Potentially dangerous LMM copper species in the cytosol of metallothionein-deficient cells may traffic into vacuoles for sequestration and detoxification.

Indexed as

Coordination ComplexesCopperIronManganesePhosphorusPolyphosphatesSaccharomyces cerevisiaeVacuolesZincCoordination ComplexesCopperIronManganesePhosphorusPolyphosphatesZinc

Identifiers

PMID31210222
PMCPMC7175454
OpenAlexW2950045626

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.