Evidence map›Paper›PMID 31209400›Full record

ArticleNature immunology2019

Single-cell RNA-seq reveals TOX as a key regulator of CD8

Chen Yao, Hong-Wei Sun, Neal E Lacey, Yun Ji, E Ashley Moseman, Han-Yu Shih, Elisabeth F Heuston, Martha Kirby, Stacie Anderson, Jun Cheng and 12 more

Abstract read
In one paragraph

Article in Nature immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 348 papers.

0numbers the graph read from it
0cells of the map it votes in
348citing papers in PubMed
24.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

348 citing papers in PubMed, 549 citations in OpenAlex.

  1. Article
  2. Article
  3. Spatiotemporal CD8Cancer science · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. T cell adaptation in chronic infections and tumors.Cellular & molecular immunology · 2026
    Review
  11. TOX drives CD4Nature immunology · 2026
    Article
  12. Article
  13. Tumor-targeted IL2 promotes specific CD8Journal of experimental & clinical cancer research : CR · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Regulators of CD8Nature reviews. Immunology · 2026
    Review
  20. CD27 and ICOS as Targets of PD-1/PD-L1 Signaling to Regulate Resident Memory CD8Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article

288 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 1 country.

Chen YaoNational Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA.
Hong-Wei SunNational Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA.
Neal E LaceyNational Cancer Institute, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-3633-5924
Yun JiNational Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
E Ashley MosemanNational Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
Han-Yu ShihNational Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-7525-5433
Elisabeth F HeustonNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Martha KirbyNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0001-7157-7964
Stacie AndersonNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Jun ChengNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Omar KhanDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania Perelman School Medicine, Philadelphia, PA, USA.
Robin HandonNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Julie ReilleyNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Jessica FioravantiNational Cancer Institute, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0001-6263-4306
Jinhui HuNational Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Selamawit GossaNational Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.
E John WherryDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania Perelman School Medicine, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0003-0477-1956
Luca GattinoniNational Cancer Institute, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0003-2239-3282
Dorian B McGavernNational Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0001-9568-545X
John J O'SheaNational Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA. osheaj@arb.niams.nih.gov.ORCID http://orcid.org/0000-0002-6456-9752
Pamela L SchwartzbergNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA. pams@nih.gov.ORCID http://orcid.org/0000-0001-6318-9187
Tuoqi WuNational Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA. tuoqi.wu@ucdenver.edu.ORCID http://orcid.org/0000-0002-4003-1034
National Institutes of Health · USTranslational Therapeutics (United States) · US

Funding

Stat transcription factors in immunoregulation and autoimmune diseaseZIAAR041159 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI O'SHEA, JOHN · 2009 to 2025
$49.3M
Mechanisms Underlying Clearance of the Persistently Infected CNSZIANS003111 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI MCGAVERN, DORIAN · 2009 to 2025
$33.0M
Genetic and Biochemical Approaches to Tyrosine Kinase and Lymphocyte SignalingZIAAI001240 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI SCHWARTZBERG, PAMELA · 2019 to 2025
$18.8M
NHGRI/DIR Flow Cytometry CoreZICHG200350 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ANDERSON, STACIE · 2010 to 2025
$16.3M
Applying Bioinformatics to Research in Immune, Muscle, and Bone DiseasesZIHAR041173 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI GADINA, MASSIMO · 2009 to 2020
$11.0M
Programming T Cell Fates for Therapeutic UseZIABC011480 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GATTINONI, LUCA · 2013 to 2019
$7.4M
Rejuvenating aged T cell immunity by targeting stem cell-like CD8 T cellsR00AG056524 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI WU, TUOQI · 2019 to 2021
$733k
Intramural NIH HHS Z99 AI999999NIA NIH HHS K99 AG056524NIA NIH HHS R00 AG056524
6 · The paper itself

Abstract

Progenitor-like CD8

Indexed as

Gene Expression RegulationSingle-Cell AnalysisAnimalsBiomarkersCD8-Positive T-LymphocytesChromatin ImmunoprecipitationEpigenesis, GeneticGene Expression ProfilingHigh-Throughput Nucleotide SequencingHomeodomain ProteinsHost-Pathogen InteractionsImmunologic MemoryInfectionsLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusMiceBiomarkersHomeodomain ProteinsRhox8 protein, mouse

Identifiers

PMID31209400
PMCPMC6588409
OpenAlexW2951520325

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.