Evidence map›Paper›PMID 31209342›Full record

ArticleNature structural & molecular biology2019

GGTase3 is a newly identified geranylgeranyltransferase targeting a ubiquitin ligase.

Shafi Kuchay, Hui Wang, Antonio Marzio, Kunj Jain, Harrison Homer, Nicole Fehrenbacher, Mark R Philips, Ning Zheng, Michele Pagano

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 99 citations in OpenAlex.

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  14. ACS chemical biology · 2025
    Article
  15. Review
  16. Article
  17. Novel Roles for Geranylgeranyl Transferase-III (GGTase-III) in Insulin Secretion.Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology · 2025
    Article
  18. Review
  19. Review
  20. Genetic Analysis of Choroideremia-Related Rab Escort Proteins.International journal of molecular sciences · 2025
    Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shafi KuchayDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Hui WangDepartment of Pharmacology, University of Washington, Seattle, WA, USA.
Antonio MarzioDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Kunj JainDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Harrison HomerDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-7157-0196
Nicole FehrenbacherDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Mark R PhilipsDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Ning ZhengDepartment of Pharmacology, University of Washington, Seattle, WA, USA. nzheng@uw.edu.ORCID http://orcid.org/0000-0002-1039-1581
Michele PaganoDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA. michele.pagano@nyumc.org.ORCID http://orcid.org/0000-0003-3210-2442
New York University · USHoward Hughes Medical Institute · US

Funding

REGULATION OF THE GI PHASE BY THE UBIQUITIN PATHWAYR01GM057587 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PAGANO, MICHELE · 1998 to 2018
$7.8M
F-Box Proteins: Deregulated Cell Cycle Control and Proteolysis in CancerR01CA076584 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PAGANO, MICHELE · 1998 to 2021
$4.5M
NCI NIH HHS R01 CA076584NIGMS NIH HHS R01 GM057587
6 · The paper itself

Abstract

Protein prenylation is believed to be catalyzed by three heterodimeric enzymes: FTase, GGTase1 and GGTase2. Here we report the identification of a previously unknown human prenyltransferase complex consisting of an orphan prenyltransferase α-subunit, PTAR1, and the catalytic β-subunit of GGTase2, RabGGTB. This enzyme, which we named GGTase3, geranylgeranylates FBXL2 to allow its localization at cell membranes, where this ubiquitin ligase mediates the polyubiquitylation of membrane-anchored proteins. In cells, FBXL2 is specifically recognized by GGTase3 despite having a typical carboxy-terminal CaaX prenylation motif that is predicted to be recognized by GGTase1. Our crystal structure analysis of the full-length GGTase3-FBXL2-SKP1 complex reveals an extensive multivalent interface specifically formed between the leucine-rich repeat domain of FBXL2 and PTAR1, which unmasks the structural basis of the substrate-enzyme specificity. By uncovering a missing prenyltransferase and its unique mode of substrate recognition, our findings call for a revision of the 'prenylation code'.

Indexed as

Alkyl and Aryl TransferasesCell LineCrystallography, X-RayDimethylallyltranstransferaseF-Box ProteinsHeLa CellsHumansModels, MolecularPolyubiquitinProtein ConformationProtein PrenylationProtein SubunitsAlkyl and Aryl TransferasesDimethylallyltranstransferaseF-Box ProteinsFBXL2 protein, humanPolyubiquitinProtein SubunitsPTAR1 protein, humanRABGGTB protein, human

Identifiers

PMID31209342
PMCPMC6609460
OpenAlexW2953016882

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.