Evidence map›Paper›PMID 31209308›Full record

ArticleNature microbiology2019

Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses.

Sara Vieira-Silva, João Sabino, Mireia Valles-Colomer, Gwen Falony, Gunter Kathagen, Clara Caenepeel, Isabelle Cleynen, Schalk van der Merwe, Séverine Vermeire, Jeroen Raes

Open access · greenAbstract readLetter
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed, 3 pooled it
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 3 syntheses or guidelines pooled it, 295 citations in OpenAlex.

  1. Pooled it
  2. Intestinal microbiota and biliary system diseases.Frontiers in cellular and infection microbiology · 2024
    Pooled it
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  13. A Review on the Molecular Dynamics of EnterotypeInternational journal of molecular sciences · 2026
    Review
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87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sara Vieira-SilvaLaboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.ORCID http://orcid.org/0000-0002-4616-7602
João SabinoTranslational Research Center for Gastrointestinal Disorders (TARGID), KU Leuven, Leuven, Belgium.
Mireia Valles-ColomerLaboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.ORCID http://orcid.org/0000-0002-1988-6054
Gwen FalonyLaboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.
Gunter KathagenLaboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.
Clara CaenepeelTranslational Research Center for Gastrointestinal Disorders (TARGID), KU Leuven, Leuven, Belgium.
Isabelle CleynenDepartment of Human Genetics, KU Leuven, Leuven, Belgium.ORCID http://orcid.org/0000-0003-0857-7683
Schalk van der MerweTranslational Research Center for Gastrointestinal Disorders (TARGID), KU Leuven, Leuven, Belgium.
Séverine VermeireTranslational Research Center for Gastrointestinal Disorders (TARGID), KU Leuven, Leuven, Belgium. severine.vermeire@uzleuven.be.ORCID http://orcid.org/0000-0001-9942-3019
Jeroen RaesLaboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium. jeroen.raes@kuleuven.be.ORCID http://orcid.org/0000-0002-1337-041X
KU Leuven · BERega Institute for Medical Research · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent work has highlighted the importance of confounder control in microbiome association studies

Indexed as

BacteriaBacteroidesCholangitis, SclerosingEnterococcusFecesFemaleFusobacteriumHumansInflammatory Bowel DiseasesMaleMetagenomicsMiddle Aged

Identifiers

PMID31209308
OpenAlexW2953200221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.