Evidence map›Paper›PMID 31209250›Full record

ArticleCell research2019

Intragenic antagonistic roles of protein and circRNA in tumorigenesis.

Jlenia Guarnerio, Yang Zhang, Giulia Cheloni, Riccardo Panella, Jesse Mae Katon, Mark Simpson, Akinobu Matsumoto, Antonella Papa, Cristian Loretelli, Andreas Petri and 10 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cell research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 168 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Online Databases in Circular RNAs.Advances in experimental medicine and biology · 2025
    Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Circular RNAs in Cell Cycle Regulation of Cancers.International journal of molecular sciences · 2024
    Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. The influence of sex hormones on renal cell carcinoma.Therapeutic advances in medical oncology · 2024
    Review

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 2 countries.

Jlenia GuarnerioCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Yang Zhang *Cancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Giulia Cheloni *Cancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Riccardo Panella *Cancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Jesse Mae KatonCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Mark SimpsonDepartment of Microbiology, Biochemistry and Molecular Genetics, Rutgers University, Newark, NJ, 07103, USA.
Akinobu MatsumotoCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Antonella PapaCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0001-8653-7121
Cristian LoretelliCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.
Andreas PetriCenter for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen, Denmark; Department of Hematology, Aalborg University Hospital, Aalborg, Denmark.
Sakari KauppinenCenter for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen, Denmark; Department of Hematology, Aalborg University Hospital, Aalborg, Denmark.
Cassandra GarbuttMGH Center for Sarcoma and Connective Tissue Oncology, Department of Orthopedic Surgery, New York, USA.
Gunnlaugur Petur NielsenMGH Center for Sarcoma and Connective Tissue Oncology, Department of Pathology, New York, USA.
Vikram DeshpandeMGH Center for Sarcoma and Connective Tissue Oncology, Department of Pathology, New York, USA.
Mireia Castillo-MartinDepartment of Pathology, Mount Sinai School of Medicine, The Mount Sinai Medical Center, New York, NY, 10029, USA.
Carlos Cordon-CardoDepartment of Pathology, Mount Sinai School of Medicine, The Mount Sinai Medical Center, New York, NY, 10029, USA.
Spentzos DimitriosMGH Center for Sarcoma and Connective Tissue Oncology, Department of Orthopedic Surgery, New York, USA.
John G ClohessyCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0001-5186-9775
Mona BatishDepartment of Microbiology, Biochemistry and Molecular Genetics, Rutgers University, Newark, NJ, 07103, USA.
Pier Paolo PandolfiCancer Research Institute, Beth Israel Deaconess Cancer Center, Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, 02215, USA. ppandolf@bidmc.harvard.edu.ORCID http://orcid.org/0000-0002-5352-5295
Beth Israel Deaconess Medical Center · USAalborg University Hospital · DKMount Sinai Medical Center · USRutgers, The State University of New Jersey · USCedars-Sinai Medical Center · US

Funding

Targeting Tumor Suppressive Pathways for Cancer TherapyR35CA197529 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI PANDOLFI, PIER PAOLO · 2015 to 2019
$4.6M
DETECTION OF CHROMOSOMAL TRANSLOCATIONS BY SINGLE MOLECULE RNA IMAGINGDP5OD012160 · OD · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI BATISH, MONA · 2012 to 2016
$2.1M
Integrated models for metastatic phenotype and outcome prediction in osteosarcomaR01CA178908 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI SPENTZOS, DIMITRIOS · 2014 to 2018
$1.8M
Investigation and functional characterization of new drivers of mesenchymal tumorigenesis.R00CA212200 · NCI · CEDARS-SINAI MEDICAL CENTER · PI GUARNERIO, JLENIA · 2018 to 2020
$710k
Investigation and functional characterization of new drivers of mesenchymal tumorigenesis.K99CA212200 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI GUARNERIO, JLENIA · 2016 to 2017
$204k
NCI NIH HHS K99 CA212200NCI NIH HHS R00 CA212200NCI NIH HHS R01 CA178908NCI NIH HHS R35 CA197529NIH HHS DP5 OD012160
6 · The paper itself

Abstract

circRNAs arise from back splicing events during mRNA processing, and when deregulated can play an active role in cancer. Here we characterize a new circRNA (circPOK) encoded by the Zbtb7a gene (also kown as POKEMON, LRF) in the context of mesenchymal tumor progression. circPOK functions as a non-coding proto-oncogenic RNA independently and antithetically to its linear transcript counterpart, which acts as a tumor suppressor by encoding the Pokemon transcription factor. We find that circPOK regulates pro-proliferative and pro-angiogenic factors by co-activation of the ILF2/3 complex. Importantly, the expression of Pokemon protein and circRNA is aberrantly uncoupled in cancer through differential post-transcriptional regulation. Thus, we identify a novel type of genetic unit, the iRegulon, that yields biochemically distinct RNA products, circular and linear, with diverse and antithetical functions. Our findings further expand the cellular repertoire towards the control of normal biological outputs, while aberrant expression of such components may underlie disease pathogenesis including cancer.

Indexed as

Alternative SplicingAnimalsCarcinogenesisCell Line, TumorDNA-Binding ProteinsExonsGene Expression Regulation, NeoplasticGene Knockout TechniquesHEK293 CellsHumansMesenchymal Stem CellsMiceMice, Inbred C57BLMice, KnockoutProto-OncogenesRNA, CircularDNA-Binding ProteinsRNA, CircularRNA, Small InterferingTranscription FactorsZBTB7A protein, humanZbtb7a protein, mouse

Identifiers

PMID31209250
PMCPMC6796857
OpenAlexW2949259826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.