Evidence map›Paper›PMID 31208284›Full record

ArticleEpigenetics2019

DNA methylation changes following DNA damage in prostate cancer cells.

Laura P Sutton, Sarah A Jeffreys, Jessica L Phillips, Phillippa C Taberlay, Adele F Holloway, Mark Ambrose, Ji-Hoon E Joo, Arabella Young, Rachael Berry, Marketa Skala and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Epigenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. TET1 Regulates Nestin Expression and Human Airway Smooth Muscle Proliferation.American journal of respiratory cell and molecular biology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Inflammation and DNA damage: cause, effect or both.Nature reviews. Rheumatology · 2023
    Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Laura P Suttona School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-1084-1941
Sarah A Jeffreysa School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-3796-2268
Jessica L Phillipsa School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-5559-3072
Phillippa C Taberlaya School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-5298-8730
Adele F Hollowaya School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0003-2213-1717
Mark Ambrosea School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-8031-8240
Ji-Hoon E Joob Colorectal Oncogenomics Group, Department of Clinical Pathology & University of Melbourne Centre for Cancer Research, The University of Melbourne , Parkville , Australia.ORCID 0000-0003-3331-5335
Arabella Younga School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.
Rachael Berrya School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0001-7172-8830
Marketa Skalac Department of Radiation Oncology, Royal Hobart Hospital , Hobart , Australia.ORCID 0000-0002-1330-9811
Kate H Brettingham-Moorea School of Medicine, College of Health and Medicine, University of Tasmania , Hobart , Australia.ORCID 0000-0002-4304-4586
University of Tasmania · AURoyal Hobart Hospital · AUThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many cancer therapies operate by inducing double-strand breaks (DSBs) in cancer cells, however treatment-resistant cells rapidly initiate mechanisms to repair damage enabling survival. While the DNA repair mechanisms responsible for cancer cell survival following DNA damaging treatments are becoming better understood, less is known about the role of the epigenome in this process. Using prostate cancer cell lines with differing sensitivities to radiation treatment, we analysed the DNA methylation profiles prior to and following a single dose of radiotherapy (RT) using the Illumina Infinium HumanMethylation450 BeadChip platform. DSB formation and repair, in the absence and presence of the DNA hypomethylating agent, 5-azacytidine (5-AzaC), were also investigated using γH2A.X immunofluorescence staining. Here we demonstrate that DNA methylation is generally stable following a single dose of RT; however, a small number of CpG sites are stably altered up to 14 d following exposure. While the radioresistant and radiosensitive cells displayed distinct basal DNA methylation profiles, their susceptibility to DNA damage appeared similar demonstrating that basal DNA methylation has a limited influence on DSB induction at the regions examined. Recovery from DSB induction was also similar between these cells. Treatment with 5-AzaC did not sensitize resistant cells to DNA damage, but rather delayed recruitment of phosphorylated BRCA1 (S1423) and repair of DSBs. These results highlight that stable epigenetic changes are possible following a single dose of RT and may have significant clinical implications for cancer treatment involving recurrent or fractionated dosing regimens.

Indexed as

DNA DamageDNA MethylationAzacitidineBRCA1 ProteinCell Line, TumorCpG IslandsEpigenesis, GeneticHigh-Throughput Nucleotide SequencingHumansMalePC-3 CellsPhosphorylationProstatic NeoplasmsRadiation ToleranceSequence Analysis, DNAAzacitidineBRCA1 ProteinBRCA1 protein, humanDNA damageDNA methylationDNA repairepigeneticsProstate cancerradiation resistanceradiotherapytreatment response

Identifiers

PMID31208284
PMCPMC6691980
OpenAlexW2950047764

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.