Evidence map›Paper›PMID 31207885›Full record

ArticleInternational journal of molecular sciences2019

Fine Mapping of Glutamate Decarboxylase 65 Epitopes Reveals Dependency on Hydrophobic Amino Acids for Specific Interactions.

Niccolò Valdarnini, Bettina Holm, Paul Hansen, Paolo Rovero, Gunnar Houen, Nicole Trier

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Peptide Antibodies: Current Status.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  2. Antibody Cross-Reactivity in Auto-Immune Diseases.International journal of molecular sciences · 2023
    Review
  3. Determination of crucial epitopes in the sperm protein calsperin employing synthetic peptides and monoclonal antibodies.Journal of peptide science : an official publication of the European Peptide Society · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Peptides, Antibodies, Peptide Antibodies and More.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Niccolò ValdarniniInterdepartmental Laboratory of Peptide and Protein Chemistry and Biology, Department of NeuroFarBa, University of Florence, Via Ugo Schiff, 6, 50019 Sesto Fiorentino, Italy. valdarnini91@gmail.com.
Bettina HolmDepartment of Clinical Immunology, Rigshospitalet, Ole Maaløes vej 26, 2200 Copenhagen N, Denmark. Bettina.eide.holm@regionh.dk.
Paul HansenDepartment of Drug Design and Pharmacology, Universitetsparken 2, 2100 Copenhagen Ø, Denmark. prh@sund.ku.dk.ORCID 0000-0001-9357-8001
Paolo RoveroInterdepartmental Laboratory of Peptide and Protein Chemistry and Biology, Department of NeuroFarBa, University of Florence, Via Ugo Schiff, 6, 50019 Sesto Fiorentino, Italy. paolo.rovero@unifi.it.ORCID 0000-0001-9577-5228
Gunnar HouenDepartment of Neurology, Rigshospitalet Glostrup, Nordre Ringvej 57, 2600 Glostrup, Denmark. Gunnar.houen@regionh.dk.
Nicole TrierDepartment of Neurology, Rigshospitalet Glostrup, Nordre Ringvej 57, 2600 Glostrup, Denmark. Nicole.hartwig.trier@regionh.dk.
Glostrup Hospital · DKUniversity of Florence · ITRigshospitalet · DKUniversity of Copenhagen · DK

Funding

Lundbeckfonden R231-2016-3622
6 · The paper itself

Abstract

Characterization of multiple antibody epitopes has revealed the necessity of specific groups of amino acid residues for reactivity. This applies to the majority of antibody-antigen interactions, where especially charged and hydrophilic amino acids have been reported to be essential for antibody reactivity. This study describes thorough characterization of glutamic acid decarboxylase (GAD) 65 antigenic epitopes, an immunodominant autoantigen in type 1 diabetes (T1D). As linear epitopes are sparsely described for GAD65 in T1D, we aimed to identify and thoroughly characterize two GAD65 antibodies using immunoassays. A monoclonal antibody recognized an epitope in the N-terminal domain of GAD65,

Indexed as

Amino Acid MotifsAntibodies, MonoclonalEpitopesGlutamate DecarboxylaseHumansHydrophobic and Hydrophilic InteractionsMolecular Dynamics SimulationAntibodies, MonoclonalEpitopesGlutamate Decarboxylaseglutamate decarboxylase 2antibodyantigenglutamate decarboxylasepeptidestype 1 diabetes

Identifiers

PMID31207885
PMCPMC6627456
OpenAlexW2949912436

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.