Evidence map›Paper›PMID 31207231›Full record

ArticleThe Journal of investigative dermatology2019

Quantitative Trait Locus and Integrative Genomics Revealed Candidate Modifier Genes for Ectopic Mineralization in Mouse Models of Pseudoxanthoma Elasticum.

Qiaoli Li, Vivek M Philip, Timothy M Stearns, Jason A Bubier, Benjamin L King, Benjamin E Low, Michael V Wiles, Amir Hossein Saeidian, Beth A Sundberg, Jouni Uitto and 1 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Genetic heterogeneity of heritable ectopic mineralization disorders in a large international cohort.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Qiaoli LiDepartment of Dermatology and Cutaneous Biology, Jefferson Institute of Molecular Medicine, and the PXE International Center of Excellence in Research and Clinical Care, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA. Electronic address: Qiaoli.Li@jefferson.edu.
Vivek M PhilipThe Jackson Laboratory, Bar Harbor, Maine, USA.
Timothy M StearnsThe Jackson Laboratory, Bar Harbor, Maine, USA.
Jason A BubierThe Jackson Laboratory, Bar Harbor, Maine, USA.
Benjamin L KingDepartment of Molecular and Biomedical Sciences, University of Maine, Orono, Maine, USA.
Benjamin E LowThe Jackson Laboratory, Bar Harbor, Maine, USA.
Michael V WilesThe Jackson Laboratory, Bar Harbor, Maine, USA.
Amir Hossein SaeidianDepartment of Dermatology and Cutaneous Biology, Jefferson Institute of Molecular Medicine, and the PXE International Center of Excellence in Research and Clinical Care, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA; Genetics, Genomics and Cancer Biology PhD Program, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
Beth A SundbergThe Jackson Laboratory, Bar Harbor, Maine, USA.
Jouni UittoDepartment of Dermatology and Cutaneous Biology, Jefferson Institute of Molecular Medicine, and the PXE International Center of Excellence in Research and Clinical Care, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.
John P SundbergThe Jackson Laboratory, Bar Harbor, Maine, USA.
Jackson Laboratory · USThomas Jefferson University · USUniversity of Maine · US

Funding

The Maine Biomedical Research Network (INBRE)P20GM103423 · NIGMS · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI JAMES A COFFMAN · 2012 to 2026
$60.0M
BIOCHEMISTRY AND MORPHOLOGY OF CONNECTIVE TISSUESR01AR028450 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI UITTO, JOUNI · 1986 to 2019
$6.5M
Novel Treatments for PXER01AR072695 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI LI, QIAOLI, VAN DE WETERING, KOEN · 2018 to 2022
$1.7M
Modifier Genes for Ectopic MineralizationK01AR064766 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI LI, QIAOLI · 2014 to 2018
$634k
NIAMS NIH HHS K01 AR064766NIAMS NIH HHS R01 AR028450NIAMS NIH HHS R01 AR072695NIGMS NIH HHS P20 GM103423
6 · The paper itself

Abstract

Pseudoxanthoma elasticum, a prototype of heritable multisystem ectopic mineralization disorders, is caused by mutations in the ABCC6 gene encoding a putative efflux transporter, ABCC6. The phenotypic spectrum of pseudoxanthoma elasticum varies, and the correlation between genotype and phenotype has not been established. To identify genetic modifiers, we performed quantitative trait locus analysis in inbred mouse strains that carry the same hypomorphic allele in Abcc6 yet with highly variable ectopic mineralization phenotypes of pseudoxanthoma elasticum. Abcc6 was confirmed as a major determinant for ectopic mineralization in multiple tissues. Integrative analysis using functional genomics tools that included GeneWeaver, String, and Mouse Genome Informatics identified a total of nine additional candidate modifier genes that could influence the organ-specific ectopic mineralization phenotypes. Integration of the candidate genes into the existing ectopic mineralization gene network expands the current knowledge on the complexity of the network that, as a whole, governs ectopic mineralization in soft connective tissues.

Indexed as

Polymorphism, Single NucleotideAnimalsATP-Binding Cassette, Sub-Family C ProteinsDisease Models, AnimalDNAFemaleGenes, ModifierGenotypeMaleMiceMice, Inbred C57BLMice, KnockoutPhenotypePseudoxanthoma ElasticumQuantitative Trait LociAbcc6 protein, mouseATP-Binding Cassette, Sub-Family C ProteinsDNA

Identifiers

PMID31207231
PMCPMC6874750
OpenAlexW2952235692

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.